Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC-0.16□□□□□ -2.43
HttP42859 Gm27420-201ENSMUST00000183823 79 ntBASIC-0.16□□□□□ -2.43
HttP42859 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
HttP42859 AC188459.1-201ENSMUST00000216651 300 ntBASIC-0.16□□□□□ -2.43
HttP42859 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.16□□□□□ -2.43
HttP42859 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
HttP42859 Mir19b-1-201ENSMUST00000102301 87 ntBASIC-0.16□□□□□ -2.43
HttP42859 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
HttP42859 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.16□□□□□ -2.43
HttP42859 Gm2628-201ENSMUST00000218019 426 ntBASIC-0.16□□□□□ -2.43
HttP42859 CT009733.1-201ENSMUST00000225322 425 ntBASIC-0.16□□□□□ -2.43
HttP42859 Gm44336-201ENSMUST00000203696 468 ntBASIC-0.16□□□□□ -2.44
HttP42859 AC160863.1-201ENSMUST00000218412 317 ntBASIC-0.16□□□□□ -2.44
HttP42859 Gm46193-201ENSMUST00000219399 364 ntBASIC-0.16□□□□□ -2.44
HttP42859 Gm22796-201ENSMUST00000157234 106 ntBASIC-0.17□□□□□ -2.44
HttP42859 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.17□□□□□ -2.44
HttP42859 Gm37869-201ENSMUST00000193385 595 ntBASIC-0.17□□□□□ -2.44
HttP42859 Gm43531-201ENSMUST00000200676 1114 ntBASIC-0.17□□□□□ -2.44
HttP42859 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC-0.17□□□□□ -2.44
HttP42859 AC153936.1-201ENSMUST00000219874 395 ntBASIC-0.17□□□□□ -2.44
HttP42859 Gm13992-201ENSMUST00000120558 156 ntBASIC-0.17□□□□□ -2.44
HttP42859 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.17□□□□□ -2.44
HttP42859 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.17□□□□□ -2.44
HttP42859 Gm23102-201ENSMUST00000083724 116 ntBASIC-0.17□□□□□ -2.44
HttP42859 AC134917.1-201ENSMUST00000220517 1449 ntBASIC-0.18□□□□□ -2.44
HttP42859 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
HttP42859 Gm13806-201ENSMUST00000117822 325 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm14785-201ENSMUST00000120185 539 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm22164-201ENSMUST00000158413 106 ntBASIC-0.18□□□□□ -2.44
HttP42859 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.18□□□□□ -2.44
HttP42859 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC-0.18□□□□□ -2.44
HttP42859 AC157772.2-201ENSMUST00000228202 259 ntBASIC-0.18□□□□□ -2.44
HttP42859 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
HttP42859 Gm25851-201ENSMUST00000082794 107 ntBASIC-0.18□□□□□ -2.44
HttP42859 Mir125b-2-201ENSMUST00000083538 71 ntBASIC-0.18□□□□□ -2.44
HttP42859 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm11358-201ENSMUST00000122310 373 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm25335-201ENSMUST00000158043 103 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28110-201ENSMUST00000185782 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29057-201ENSMUST00000186468 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28737-201ENSMUST00000186808 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29147-201ENSMUST00000186846 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29118-201ENSMUST00000186908 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28433-201ENSMUST00000187085 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29227-201ENSMUST00000187139 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28759-201ENSMUST00000187621 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28831-201ENSMUST00000187739 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29034-201ENSMUST00000188099 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28752-201ENSMUST00000188340 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28474-201ENSMUST00000188501 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28569-201ENSMUST00000188748 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28120-201ENSMUST00000188812 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28369-201ENSMUST00000188993 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28537-201ENSMUST00000189026 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28861-201ENSMUST00000189681 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28717-201ENSMUST00000189950 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29180-201ENSMUST00000190003 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29631-201ENSMUST00000191065 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm28160-201ENSMUST00000191229 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC-0.18□□□□□ -2.44
HttP42859 Gm29469-201ENSMUST00000191448 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm37658-201ENSMUST00000192672 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm37129-201ENSMUST00000195791 315 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm45146-201ENSMUST00000207108 221 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.18□□□□□ -2.44
HttP42859 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC-0.18□□□□□ -2.44
HttP42859 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC-0.18□□□□□ -2.44
HttP42859 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC-0.18□□□□□ -2.44
HttP42859 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC-0.18□□□□□ -2.44
HttP42859 AC112935.1-201ENSMUST00000227603 250 ntBASIC-0.18□□□□□ -2.44
HttP42859 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.18□□□□□ -2.44
HttP42859 Gm11367-201ENSMUST00000117802 120 ntBASIC-0.19□□□□□ -2.44
HttP42859 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
HttP42859 Gm21744-201ENSMUST00000178403 662 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm43090-201ENSMUST00000202459 314 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
HttP42859 Gm14771-201ENSMUST00000118249 203 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm28755-201ENSMUST00000185773 199 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.19□□□□□ -2.44
HttP42859 Mir137-201ENSMUST00000083635 73 ntBASIC-0.19□□□□□ -2.44
HttP42859 Olfr575-201ENSMUST00000084812 957 ntBASIC-0.19□□□□□ -2.44
HttP42859 Gm11606-201ENSMUST00000120706 617 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm22299-201ENSMUST00000082663 136 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm26038-201ENSMUST00000158151 106 ntBASIC-0.2□□□□□ -2.44
HttP42859 Mir6388-201ENSMUST00000184417 75 ntBASIC-0.2□□□□□ -2.44
HttP42859 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
HttP42859 AC173482.2-201ENSMUST00000224044 750 ntBASIC-0.2□□□□□ -2.44
HttP42859 AC126939.3-201ENSMUST00000226061 166 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm12080-201ENSMUST00000119821 1883 ntBASIC-0.2□□□□□ -2.44
HttP42859 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC-0.2□□□□□ -2.44
HttP42859 Gm42719-201ENSMUST00000197393 355 ntBASIC-0.2□□□□□ -2.44
HttP42859 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
HttP42859 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.21□□□□□ -2.44
HttP42859 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC-0.21□□□□□ -2.44
HttP42859 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms