Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm25933-201ENSMUST00000178943 108 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm45386-201ENSMUST00000210194 218 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm45402-201ENSMUST00000211796 223 ntBASIC2.37□□□□□ -2.03
Traf1P39428 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.37□□□□□ -2.03
Traf1P39428 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.37□□□□□ -2.03
Traf1P39428 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.37□□□□□ -2.03
Traf1P39428 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm24623-201ENSMUST00000082616 194 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm25788-201ENSMUST00000082721 131 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm24338-201ENSMUST00000104205 127 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm14287-201ENSMUST00000121060 117 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm15365-201ENSMUST00000122392 300 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm25269-201ENSMUST00000122601 104 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.36□□□□□ -2.03
Traf1P39428 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Traf1P39428 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.36□□□□□ -2.03
Traf1P39428 Gm42570-201ENSMUST00000195937 292 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.36□□□□□ -2.03
Traf1P39428 Gm43914-201ENSMUST00000203592 594 ntBASIC2.36□□□□□ -2.03
Traf1P39428 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.36□□□□□ -2.03
Traf1P39428 Gm25651-201ENSMUST00000083782 119 ntBASIC2.36□□□□□ -2.03
Traf1P39428 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Traf1P39428 Gm13439-201ENSMUST00000117541 409 ntBASIC2.35□□□□□ -2.03
Traf1P39428 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.35□□□□□ -2.03
Traf1P39428 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Traf1P39428 Gm24551-201ENSMUST00000158645 92 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Gm26157-201ENSMUST00000158974 126 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Gm27878-201ENSMUST00000184000 106 ntBASIC2.35□□□□□ -2.03
Traf1P39428 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Traf1P39428 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Traf1P39428 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.35□□□□□ -2.03
Traf1P39428 Gm44666-201ENSMUST00000208544 391 ntBASIC2.35□□□□□ -2.03
Traf1P39428 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Mir300-201ENSMUST00000083485 79 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Mir29c-201ENSMUST00000083614 88 ntBASIC2.35□□□□□ -2.03
Traf1P39428 Gm23950-201ENSMUST00000104026 129 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm25773-201ENSMUST00000116718 127 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm15010-201ENSMUST00000117153 407 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm13475-201ENSMUST00000119290 234 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm24857-201ENSMUST00000158061 310 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm25956-201ENSMUST00000175115 217 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm21737-201ENSMUST00000178112 664 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm21815-201ENSMUST00000178213 664 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm20901-201ENSMUST00000180177 664 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm27443-201ENSMUST00000184660 98 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm28090-201ENSMUST00000189458 664 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm21647-201ENSMUST00000189755 664 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm43676-201ENSMUST00000197532 540 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm43583-201ENSMUST00000199235 303 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm43865-201ENSMUST00000204721 127 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm26457-201ENSMUST00000082678 78 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Gm26066-201ENSMUST00000083385 109 ntBASIC2.34□□□□□ -2.03
Traf1P39428 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Traf1P39428 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Traf1P39428 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Traf1P39428 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm24892-201ENSMUST00000122747 104 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm16328-201ENSMUST00000126985 196 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm22136-201ENSMUST00000158751 268 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm7592-201ENSMUST00000160674 627 ntBASIC2.33□□□□□ -2.04
Traf1P39428 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Traf1P39428 Mir6399-201ENSMUST00000184050 84 ntBASIC2.33□□□□□ -2.04
Traf1P39428 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Traf1P39428 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Traf1P39428 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Traf1P39428 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.33□□□□□ -2.04
Traf1P39428 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.33□□□□□ -2.04
Traf1P39428 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm15443-201ENSMUST00000118947 820 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm6444-201ENSMUST00000119611 458 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm23342-201ENSMUST00000158958 115 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm20874-201ENSMUST00000178356 663 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Traf1P39428 Mir6995-201ENSMUST00000183658 71 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Mir8090-201ENSMUST00000185078 136 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm28058-201ENSMUST00000186421 264 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm28489-201ENSMUST00000186655 316 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm44337-201ENSMUST00000196553 114 ntBASIC2.32□□□□□ -2.04
Traf1P39428 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.32□□□□□ -2.04
Traf1P39428 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.32□□□□□ -2.04
Traf1P39428 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Gm25124-201ENSMUST00000083345 164 ntBASIC2.32□□□□□ -2.04
Traf1P39428 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Traf1P39428 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Traf1P39428 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.31□□□□□ -2.04
Traf1P39428 Gm15281-201ENSMUST00000125181 351 ntBASIC2.31□□□□□ -2.04
Traf1P39428 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.31□□□□□ -2.04
Traf1P39428 Gm44726-201ENSMUST00000203427 217 ntBASIC2.31□□□□□ -2.04
Traf1P39428 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.31□□□□□ -2.04
Traf1P39428 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.31□□□□□ -2.04
Traf1P39428 Gm8125-201ENSMUST00000216602 738 ntBASIC2.31□□□□□ -2.04
Traf1P39428 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Traf1P39428 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Traf1P39428 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.3□□□□□ -2.04
Traf1P39428 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Traf1P39428 Mir3096-201ENSMUST00000116685 71 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms