Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.42□□□□□ -2.02
BdnfP21237 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.42□□□□□ -2.02
BdnfP21237 Gm22768-201ENSMUST00000158366 153 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm20462-201ENSMUST00000172623 408 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm23268-201ENSMUST00000175494 78 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Mir3965-201ENSMUST00000175570 69 ntBASIC2.42□□□□□ -2.02
BdnfP21237 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BdnfP21237 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.42□□□□□ -2.02
BdnfP21237 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.42□□□□□ -2.02
BdnfP21237 Gm36953-201ENSMUST00000195295 268 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm23128-202ENSMUST00000196578 133 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm43723-201ENSMUST00000196886 189 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Mir1291-201ENSMUST00000199842 117 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm34314-201ENSMUST00000203622 367 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm44655-201ENSMUST00000207768 423 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm22299-201ENSMUST00000082663 136 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Gm24043-201ENSMUST00000083108 116 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Snora34-201ENSMUST00000083402 138 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Mir429-201ENSMUST00000083493 83 ntBASIC2.42□□□□□ -2.02
BdnfP21237 Mir374b-201ENSMUST00000102314 95 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm13913-201ENSMUST00000121126 260 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm24291-201ENSMUST00000157633 162 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm22538-201ENSMUST00000158169 299 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm25994-201ENSMUST00000175392 101 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm20718-201ENSMUST00000176058 259 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm22263-201ENSMUST00000180060 104 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Mir6916-201ENSMUST00000184514 63 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm28925-201ENSMUST00000188586 168 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm2719-201ENSMUST00000191929 444 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.41□□□□□ -2.02
BdnfP21237 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.41□□□□□ -2.02
BdnfP21237 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Gm22972-201ENSMUST00000083297 131 ntBASIC2.41□□□□□ -2.02
BdnfP21237 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BdnfP21237 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
BdnfP21237 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.4□□□□□ -2.02
BdnfP21237 Gm22073-201ENSMUST00000122668 189 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm25970-201ENSMUST00000157165 86 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm22338-201ENSMUST00000157715 129 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm22731-201ENSMUST00000158086 94 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm23223-201ENSMUST00000158119 127 ntBASIC2.4□□□□□ -2.03
BdnfP21237 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BdnfP21237 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.4□□□□□ -2.03
BdnfP21237 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm26200-201ENSMUST00000180273 79 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm37807-201ENSMUST00000194310 190 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm37845-201ENSMUST00000194977 355 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm45879-201ENSMUST00000212521 392 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm22978-201ENSMUST00000082607 160 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Gm23721-201ENSMUST00000083005 107 ntBASIC2.4□□□□□ -2.03
BdnfP21237 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
BdnfP21237 Gm13439-201ENSMUST00000117541 409 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm11935-201ENSMUST00000118608 399 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm25543-201ENSMUST00000122678 312 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm24958-201ENSMUST00000158009 97 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm24333-201ENSMUST00000175101 84 ntBASIC2.39□□□□□ -2.03
BdnfP21237 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
BdnfP21237 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
BdnfP21237 Gm5900-201ENSMUST00000179862 375 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm25253-201ENSMUST00000179958 107 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm9892-201ENSMUST00000182415 992 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
BdnfP21237 Gm27979-201ENSMUST00000185126 56 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BdnfP21237 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BdnfP21237 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.39□□□□□ -2.03
BdnfP21237 Gm19694-201ENSMUST00000192364 505 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.39□□□□□ -2.03
BdnfP21237 Gm7495-201ENSMUST00000215099 426 ntBASIC2.39□□□□□ -2.03
BdnfP21237 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.39□□□□□ -2.03
BdnfP21237 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BdnfP21237 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.39□□□□□ -2.03
BdnfP21237 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
BdnfP21237 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
BdnfP21237 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
BdnfP21237 Gm11254-201ENSMUST00000122368 653 ntBASIC2.38□□□□□ -2.03
BdnfP21237 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Gm22221-201ENSMUST00000157362 103 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Gm26180-201ENSMUST00000179942 107 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Gm28995-201ENSMUST00000186625 261 ntBASIC2.38□□□□□ -2.03
BdnfP21237 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BdnfP21237 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BdnfP21237 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.38□□□□□ -2.03
BdnfP21237 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.38□□□□□ -2.03
BdnfP21237 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
BdnfP21237 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
BdnfP21237 Gm24817-201ENSMUST00000093672 105 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Gm22365-201ENSMUST00000093750 117 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
BdnfP21237 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.38□□□□□ -2.03
BdnfP21237 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BdnfP21237 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BdnfP21237 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BdnfP21237 Gm12351-201ENSMUST00000118727 292 ntBASIC2.37□□□□□ -2.03
BdnfP21237 Gm12417-201ENSMUST00000119153 403 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms