Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.96□□□□□ -1.78
Msx1P13297 Gm22141-201ENSMUST00000157403 277 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm24553-201ENSMUST00000158653 131 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm22510-201ENSMUST00000179304 79 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm26336-201ENSMUST00000179449 79 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm26390-201ENSMUST00000179628 79 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Mir6345-201ENSMUST00000184286 128 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Gm8219-201ENSMUST00000218309 242 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Msx1P13297 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Msx1P13297 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Msx1P13297 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.96□□□□□ -1.78
Msx1P13297 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.96□□□□□ -1.78
Msx1P13297 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Msx1P13297 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Msx1P13297 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Msx1P13297 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Msx1P13297 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Msx1P13297 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Msx1P13297 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.95□□□□□ -1.78
Msx1P13297 Gm22983-201ENSMUST00000158308 104 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm22156-201ENSMUST00000158409 141 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm4468-201ENSMUST00000170206 294 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm21064-202ENSMUST00000190583 278 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm4036-201ENSMUST00000220842 626 ntBASIC3.95□□□□□ -1.78
Msx1P13297 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.95□□□□□ -1.78
Msx1P13297 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm24697-201ENSMUST00000083881 107 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Gm10242-201ENSMUST00000090064 330 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Msx1P13297 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.95□□□□□ -1.78
Msx1P13297 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Msx1P13297 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Msx1P13297 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Msx1P13297 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Msx1P13297 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Msx1P13297 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Msx1P13297 Gm24595-201ENSMUST00000122501 110 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 Gm25625-201ENSMUST00000157221 96 ntBASIC3.94□□□□□ -1.78
Msx1P13297 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Mir7667-201ENSMUST00000183866 63 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Gm28267-201ENSMUST00000191093 265 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Gm43730-201ENSMUST00000199863 372 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Gm44032-201ENSMUST00000204841 166 ntBASIC3.94□□□□□ -1.78
Msx1P13297 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Msx1P13297 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.94□□□□□ -1.78
Msx1P13297 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.94□□□□□ -1.78
Msx1P13297 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Msx1P13297 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Msx1P13297 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Msx1P13297 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msx1P13297 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Msx1P13297 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.93□□□□□ -1.78
Msx1P13297 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msx1P13297 Gm25833-201ENSMUST00000104137 133 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm24281-201ENSMUST00000104234 136 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm26019-201ENSMUST00000104407 119 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm12458-201ENSMUST00000119387 495 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm25544-201ENSMUST00000122676 120 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm23112-201ENSMUST00000158606 125 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Gm22859-201ENSMUST00000174978 122 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Mir6408-201ENSMUST00000183643 91 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msx1P13297 Gm27308-201ENSMUST00000184807 233 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.93□□□□□ -1.78
Msx1P13297 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.93□□□□□ -1.78
Msx1P13297 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.93□□□□□ -1.78
Msx1P13297 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Msx1P13297 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.93□□□□□ -1.78
Msx1P13297 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Msx1P13297 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Msx1P13297 Gm22516-201ENSMUST00000158266 124 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Msx1P13297 Mir28b-201ENSMUST00000175399 80 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm23215-201ENSMUST00000178153 121 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm27899-201ENSMUST00000184715 64 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm44326-201ENSMUST00000198226 101 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm44256-201ENSMUST00000203304 335 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm45796-201ENSMUST00000212483 114 ntBASIC3.92□□□□□ -1.78
Msx1P13297 Gm45791-201ENSMUST00000212908 352 ntBASIC3.92□□□□□ -1.78
Msx1P13297 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.92□□□□□ -1.78
Msx1P13297 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.92□□□□□ -1.78
Msx1P13297 CT571266.1-201ENSMUST00000222859 153 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms