Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RaraP11416 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RaraP11416 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.79□□□□□ -1.8
RaraP11416 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RaraP11416 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RaraP11416 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RaraP11416 Snord14c-201ENSMUST00000101927 86 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm23175-201ENSMUST00000104371 132 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm13443-201ENSMUST00000120770 555 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RaraP11416 Gm22966-201ENSMUST00000157957 129 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm23112-201ENSMUST00000158606 125 ntBASIC3.79□□□□□ -1.8
RaraP11416 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.79□□□□□ -1.8
RaraP11416 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RaraP11416 Mir7050-201ENSMUST00000184636 60 ntBASIC3.79□□□□□ -1.8
RaraP11416 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.79□□□□□ -1.8
RaraP11416 Trbv18-201ENSMUST00000194256 294 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm26265-202ENSMUST00000196326 133 ntBASIC3.79□□□□□ -1.8
RaraP11416 Gm44294-201ENSMUST00000205090 728 ntBASIC3.79□□□□□ -1.8
RaraP11416 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.79□□□□□ -1.8
RaraP11416 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.79□□□□□ -1.8
RaraP11416 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.79□□□□□ -1.8
RaraP11416 Snora70-201ENSMUST00000083047 137 ntBASIC3.79□□□□□ -1.8
RaraP11416 Mir137-201ENSMUST00000083635 73 ntBASIC3.79□□□□□ -1.8
RaraP11416 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RaraP11416 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RaraP11416 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm24582-201ENSMUST00000103967 103 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm25169-201ENSMUST00000104190 129 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm22373-201ENSMUST00000104584 89 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm5762-201ENSMUST00000119204 258 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.78□□□□□ -1.8
RaraP11416 Gm23084-201ENSMUST00000157850 114 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm22967-201ENSMUST00000157956 239 ntBASIC3.78□□□□□ -1.8
RaraP11416 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RaraP11416 Gm22192-201ENSMUST00000175128 85 ntBASIC3.78□□□□□ -1.8
RaraP11416 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.78□□□□□ -1.8
RaraP11416 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gm25632-201ENSMUST00000083112 85 ntBASIC3.78□□□□□ -1.8
RaraP11416 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RaraP11416 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.78□□□□□ -1.8
RaraP11416 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RaraP11416 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RaraP11416 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RaraP11416 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RaraP11416 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RaraP11416 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.77□□□□□ -1.81
RaraP11416 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RaraP11416 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.77□□□□□ -1.81
RaraP11416 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RaraP11416 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RaraP11416 Gm22051-201ENSMUST00000117002 127 ntBASIC3.77□□□□□ -1.81
RaraP11416 Gm14518-201ENSMUST00000117351 542 ntBASIC3.77□□□□□ -1.81
RaraP11416 Gm13687-201ENSMUST00000119857 282 ntBASIC3.77□□□□□ -1.81
RaraP11416 Gm27396-201ENSMUST00000157708 58 ntBASIC3.77□□□□□ -1.81
RaraP11416 Gm5010-201ENSMUST00000213131 260 ntBASIC3.77□□□□□ -1.81
RaraP11416 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.77□□□□□ -1.81
RaraP11416 Gm25136-201ENSMUST00000083253 115 ntBASIC3.77□□□□□ -1.81
RaraP11416 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RaraP11416 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RaraP11416 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RaraP11416 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RaraP11416 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RaraP11416 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RaraP11416 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
RaraP11416 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RaraP11416 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RaraP11416 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
RaraP11416 Gm11704-201ENSMUST00000120031 214 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm14687-201ENSMUST00000120206 363 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm23775-201ENSMUST00000158991 249 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm7592-201ENSMUST00000160674 627 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.76□□□□□ -1.81
RaraP11416 Gm37239-201ENSMUST00000193510 141 ntBASIC3.76□□□□□ -1.81
RaraP11416 Mir3068-202ENSMUST00000197755 79 ntBASIC3.76□□□□□ -1.81
RaraP11416 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm25142-201ENSMUST00000082698 107 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm25856-201ENSMUST00000082786 75 ntBASIC3.76□□□□□ -1.81
RaraP11416 Gm10242-201ENSMUST00000090064 330 ntBASIC3.76□□□□□ -1.81
RaraP11416 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RaraP11416 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RaraP11416 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RaraP11416 Gm23320-201ENSMUST00000104462 127 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm23602-201ENSMUST00000157258 132 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm23592-201ENSMUST00000157859 117 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm24601-201ENSMUST00000157970 143 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm23666-201ENSMUST00000158053 116 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm25267-201ENSMUST00000158522 63 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm23337-201ENSMUST00000158959 118 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm10357-201ENSMUST00000159886 264 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm27392-201ENSMUST00000185041 101 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RaraP11416 Gm34139-201ENSMUST00000196166 294 ntBASIC3.75□□□□□ -1.81
RaraP11416 Gm43814-201ENSMUST00000197851 413 ntBASIC3.75□□□□□ -1.81
RaraP11416 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RaraP11416 Gm43993-201ENSMUST00000203972 247 ntBASIC3.75□□□□□ -1.81
RaraP11416 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.75□□□□□ -1.81
RaraP11416 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.75□□□□□ -1.81
RaraP11416 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms