Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Chmp6P0C0A3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.59□□□□□ -2.15
Chmp6P0C0A3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Chmp6P0C0A3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Chmp6P0C0A3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Gm20613-201ENSMUST00000175828 345 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Chmp6P0C0A3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Ear14-201ENSMUST00000049559 468 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.58□□□□□ -2.16
Chmp6P0C0A3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm25938-201ENSMUST00000104139 166 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm24598-201ENSMUST00000122510 74 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm22315-201ENSMUST00000158010 143 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm23858-201ENSMUST00000158384 106 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm44142-201ENSMUST00000203358 311 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm40810-201ENSMUST00000219149 253 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm35558-203ENSMUST00000222264 204 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Chmp6P0C0A3 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.57□□□□□ -2.16
Chmp6P0C0A3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Chmp6P0C0A3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm16242-201ENSMUST00000117741 334 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm25956-201ENSMUST00000175115 217 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm24084-201ENSMUST00000175173 137 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm27624-201ENSMUST00000185047 177 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm28740-201ENSMUST00000186142 215 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm29350-201ENSMUST00000189141 541 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm38261-201ENSMUST00000192608 316 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm38280-201ENSMUST00000192610 158 ntBASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Chmp6P0C0A3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Mir743b-201ENSMUST00000104751 77 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm13672-201ENSMUST00000117554 459 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm25384-201ENSMUST00000157807 105 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm22328-201ENSMUST00000158074 112 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm27898-201ENSMUST00000183987 80 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm44336-201ENSMUST00000203696 468 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gm44446-201ENSMUST00000204864 255 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.55□□□□□ -2.16
Chmp6P0C0A3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Chmp6P0C0A3 Mir223-201ENSMUST00000102112 110 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24596-201ENSMUST00000122504 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24584-201ENSMUST00000157972 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25211-201ENSMUST00000177553 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24540-201ENSMUST00000177627 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25256-201ENSMUST00000177746 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm22822-201ENSMUST00000177941 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Rnu6-201ENSMUST00000178023 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm23151-201ENSMUST00000178061 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25245-201ENSMUST00000178139 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24753-201ENSMUST00000178183 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25829-201ENSMUST00000178275 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm22092-201ENSMUST00000178290 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24486-201ENSMUST00000178420 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm23217-201ENSMUST00000178482 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm26245-201ENSMUST00000178491 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm23610-201ENSMUST00000178659 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm23092-201ENSMUST00000178688 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25709-201ENSMUST00000178844 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25547-201ENSMUST00000178877 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm25312-201ENSMUST00000178972 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm24722-201ENSMUST00000179017 107 ntBASIC1.54□□□□□ -2.16
Chmp6P0C0A3 Gm22969-201ENSMUST00000179018 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms