Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm26240-201ENSMUST00000101893 105 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm23766-201ENSMUST00000103894 80 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm14868-201ENSMUST00000117840 216 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm11935-201ENSMUST00000118608 399 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm13153-201ENSMUST00000120969 637 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.67□□□□□ -1.98
Col3a1P08121 Gm25624-201ENSMUST00000157222 275 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm20526-201ENSMUST00000173416 158 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col3a1P08121 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.67□□□□□ -1.98
Col3a1P08121 Gm37692-201ENSMUST00000192633 232 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm38060-201ENSMUST00000194822 464 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm20039-201ENSMUST00000210329 394 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.67□□□□□ -1.98
Col3a1P08121 Mir410-201ENSMUST00000083563 81 ntBASIC2.67□□□□□ -1.98
Col3a1P08121 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col3a1P08121 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col3a1P08121 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col3a1P08121 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col3a1P08121 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col3a1P08121 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm25560-201ENSMUST00000104606 176 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm14296-202ENSMUST00000108931 750 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm12721-201ENSMUST00000120621 268 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm13419-201ENSMUST00000121711 271 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm16355-201ENSMUST00000128606 231 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm22093-201ENSMUST00000158980 111 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm23152-201ENSMUST00000175322 116 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm27443-201ENSMUST00000184660 98 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm44720-201ENSMUST00000206076 260 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm29884-201ENSMUST00000218403 453 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col3a1P08121 Gm23741-201ENSMUST00000097237 171 ntBASIC2.66□□□□□ -1.98
Col3a1P08121 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col3a1P08121 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col3a1P08121 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col3a1P08121 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col3a1P08121 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Col3a1P08121 Gm24867-201ENSMUST00000104161 107 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm12779-201ENSMUST00000121496 143 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm26149-201ENSMUST00000157432 108 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm23277-201ENSMUST00000157914 136 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm23892-201ENSMUST00000158105 130 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm24085-201ENSMUST00000175172 116 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Mir5098-201ENSMUST00000175320 82 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm24167-201ENSMUST00000177733 124 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm22108-201ENSMUST00000177961 106 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm24028-201ENSMUST00000178991 124 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm24798-201ENSMUST00000179334 106 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm27645-201ENSMUST00000183348 77 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Mir6393-201ENSMUST00000183709 94 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Mir6346-201ENSMUST00000183982 81 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm27733-201ENSMUST00000184803 68 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm7182-201ENSMUST00000193351 732 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.65□□□□□ -1.98
Col3a1P08121 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col3a1P08121 Gm26446-201ENSMUST00000082455 103 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Gm25755-201ENSMUST00000083396 107 ntBASIC2.65□□□□□ -1.98
Col3a1P08121 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col3a1P08121 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col3a1P08121 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm25915-201ENSMUST00000104265 126 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm11490-201ENSMUST00000118128 272 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm5396-201ENSMUST00000121222 532 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm27723-201ENSMUST00000157398 63 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm25460-201ENSMUST00000157954 127 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm26501-201ENSMUST00000178307 107 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm27624-201ENSMUST00000185047 177 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm44349-201ENSMUST00000197048 123 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Gm45772-201ENSMUST00000212961 240 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.65□□□□□ -1.99
Col3a1P08121 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col3a1P08121 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col3a1P08121 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col3a1P08121 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col3a1P08121 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Mir701-201ENSMUST00000102208 109 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Mir599-201ENSMUST00000102378 88 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm14940-201ENSMUST00000119309 495 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm25113-201ENSMUST00000157185 143 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm24237-201ENSMUST00000157790 132 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm23642-201ENSMUST00000157858 258 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm25486-201ENSMUST00000158726 63 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm17119-201ENSMUST00000163943 280 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col3a1P08121 Gm24168-201ENSMUST00000178825 107 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm25235-201ENSMUST00000179933 107 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Mir6405-201ENSMUST00000184584 124 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.64□□□□□ -1.99
Col3a1P08121 Gm37732-201ENSMUST00000194377 316 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms