Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm23548-201ENSMUST00000158963 106 ntBASIC1.86□□□□□ -2.11
P06344 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
P06344 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.86□□□□□ -2.11
P06344 Gm23813-201ENSMUST00000175153 77 ntBASIC1.86□□□□□ -2.11
P06344 Gm21737-201ENSMUST00000178112 664 ntBASIC1.86□□□□□ -2.11
P06344 Gm23660-201ENSMUST00000178362 79 ntBASIC1.86□□□□□ -2.11
P06344 Gm9830-201ENSMUST00000178509 357 ntBASIC1.86□□□□□ -2.11
P06344 Gm24088-201ENSMUST00000179100 79 ntBASIC1.86□□□□□ -2.11
P06344 Gm20901-201ENSMUST00000180177 664 ntBASIC1.86□□□□□ -2.11
P06344 Gm28090-201ENSMUST00000189458 664 ntBASIC1.86□□□□□ -2.11
P06344 Gm21647-201ENSMUST00000189755 664 ntBASIC1.86□□□□□ -2.11
P06344 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.86□□□□□ -2.11
P06344 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.86□□□□□ -2.11
P06344 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.86□□□□□ -2.11
P06344 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.86□□□□□ -2.11
P06344 Mir222-201ENSMUST00000083537 79 ntBASIC1.86□□□□□ -2.11
P06344 Gm26164-201ENSMUST00000083793 104 ntBASIC1.86□□□□□ -2.11
P06344 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.86□□□□□ -2.11
P06344 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
P06344 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.85□□□□□ -2.11
P06344 Mir701-201ENSMUST00000102208 109 ntBASIC1.85□□□□□ -2.11
P06344 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
P06344 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
P06344 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
P06344 Gm14215-201ENSMUST00000120578 221 ntBASIC1.85□□□□□ -2.11
P06344 Gm23381-201ENSMUST00000157676 94 ntBASIC1.85□□□□□ -2.11
P06344 Gm24857-201ENSMUST00000158061 310 ntBASIC1.85□□□□□ -2.11
P06344 Gm24085-201ENSMUST00000175172 116 ntBASIC1.85□□□□□ -2.11
P06344 Gm22308-201ENSMUST00000177609 107 ntBASIC1.85□□□□□ -2.11
P06344 Gm18356-201ENSMUST00000185677 623 ntBASIC1.85□□□□□ -2.11
P06344 Trbv18-201ENSMUST00000194256 294 ntBASIC1.85□□□□□ -2.11
P06344 Gm38109-201ENSMUST00000195386 181 ntBASIC1.85□□□□□ -2.11
P06344 Mir7215-201ENSMUST00000200383 51 ntBASIC1.85□□□□□ -2.11
P06344 Gm43978-201ENSMUST00000203491 451 ntBASIC1.85□□□□□ -2.11
P06344 Gm45704-201ENSMUST00000212582 403 ntBASIC1.85□□□□□ -2.11
P06344 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.85□□□□□ -2.11
P06344 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.85□□□□□ -2.11
P06344 Gm22997-201ENSMUST00000082845 107 ntBASIC1.85□□□□□ -2.11
P06344 Gm23242-201ENSMUST00000083055 107 ntBASIC1.85□□□□□ -2.11
P06344 Gm26265-201ENSMUST00000083277 135 ntBASIC1.85□□□□□ -2.11
P06344 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.85□□□□□ -2.11
P06344 Mir322-201ENSMUST00000083484 95 ntBASIC1.85□□□□□ -2.11
P06344 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
P06344 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.84□□□□□ -2.11
P06344 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.84□□□□□ -2.11
P06344 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
P06344 Gm24098-201ENSMUST00000102075 109 ntBASIC1.84□□□□□ -2.11
P06344 Gm25381-201ENSMUST00000102078 109 ntBASIC1.84□□□□□ -2.11
P06344 Gm24049-201ENSMUST00000102409 100 ntBASIC1.84□□□□□ -2.11
P06344 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
P06344 Gm14296-202ENSMUST00000108931 750 ntBASIC1.84□□□□□ -2.11
P06344 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.84□□□□□ -2.11
P06344 Gm5396-201ENSMUST00000121222 532 ntBASIC1.84□□□□□ -2.11
P06344 Gm22791-201ENSMUST00000157232 145 ntBASIC1.84□□□□□ -2.11
P06344 Gm25460-201ENSMUST00000157954 127 ntBASIC1.84□□□□□ -2.11
P06344 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.84□□□□□ -2.11
P06344 Gm27991-201ENSMUST00000184804 137 ntBASIC1.84□□□□□ -2.11
P06344 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.84□□□□□ -2.11
P06344 Gm44337-201ENSMUST00000196553 114 ntBASIC1.84□□□□□ -2.11
P06344 Gm43624-201ENSMUST00000197368 180 ntBASIC1.84□□□□□ -2.11
P06344 Mir7217-201ENSMUST00000200304 62 ntBASIC1.84□□□□□ -2.11
P06344 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.84□□□□□ -2.11
P06344 Gm44182-201ENSMUST00000204052 115 ntBASIC1.84□□□□□ -2.11
P06344 Gm18991-201ENSMUST00000209225 746 ntBASIC1.84□□□□□ -2.11
P06344 Gm45791-201ENSMUST00000212908 352 ntBASIC1.84□□□□□ -2.11
P06344 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.84□□□□□ -2.11
P06344 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
P06344 Mir30d-201ENSMUST00000083503 82 ntBASIC1.84□□□□□ -2.11
P06344 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
P06344 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
P06344 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.84□□□□□ -2.12
P06344 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.83□□□□□ -2.12
P06344 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.83□□□□□ -2.12
P06344 Gm42606-201ENSMUST00000114209 239 ntBASIC1.83□□□□□ -2.12
P06344 Gm22073-201ENSMUST00000122668 189 ntBASIC1.83□□□□□ -2.12
P06344 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.83□□□□□ -2.12
P06344 Gm24499-201ENSMUST00000158446 104 ntBASIC1.83□□□□□ -2.12
P06344 Gm22435-201ENSMUST00000158552 128 ntBASIC1.83□□□□□ -2.12
P06344 Gm10105-201ENSMUST00000184601 270 ntBASIC1.83□□□□□ -2.12
P06344 Mir7226-201ENSMUST00000184953 60 ntBASIC1.83□□□□□ -2.12
P06344 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.83□□□□□ -2.12
P06344 Gm45119-201ENSMUST00000207612 199 ntBASIC1.83□□□□□ -2.12
P06344 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.83□□□□□ -2.12
P06344 Gm2829-201ENSMUST00000213121 499 ntBASIC1.83□□□□□ -2.12
P06344 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.83□□□□□ -2.12
P06344 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.83□□□□□ -2.12
P06344 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
P06344 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
P06344 Gm26154-201ENSMUST00000102339 96 ntBASIC1.82□□□□□ -2.12
P06344 Gm24892-201ENSMUST00000122747 104 ntBASIC1.82□□□□□ -2.12
P06344 Gm22037-201ENSMUST00000157280 296 ntBASIC1.82□□□□□ -2.12
P06344 Gm22535-201ENSMUST00000158174 119 ntBASIC1.82□□□□□ -2.12
P06344 Gm7953-201ENSMUST00000168278 469 ntBASIC1.82□□□□□ -2.12
P06344 Gm22800-201ENSMUST00000175627 94 ntBASIC1.82□□□□□ -2.12
P06344 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
P06344 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.82□□□□□ -2.12
P06344 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.82□□□□□ -2.12
P06344 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.82□□□□□ -2.12
P06344 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.82□□□□□ -2.12
P06344 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms