Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm37104-201ENSMUST00000193278 196 ntBASIC2.06□□□□□ -2.08
P04224 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.06□□□□□ -2.08
P04224 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.06□□□□□ -2.08
P04224 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.06□□□□□ -2.08
P04224 Gm30534-201ENSMUST00000217928 207 ntBASIC2.06□□□□□ -2.08
P04224 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
P04224 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
P04224 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.06□□□□□ -2.08
P04224 Gm25421-201ENSMUST00000104218 164 ntBASIC2.05□□□□□ -2.08
P04224 Gm24907-201ENSMUST00000116932 128 ntBASIC2.05□□□□□ -2.08
P04224 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.05□□□□□ -2.08
P04224 Gm12926-201ENSMUST00000121158 409 ntBASIC2.05□□□□□ -2.08
P04224 Gm26027-201ENSMUST00000122725 268 ntBASIC2.05□□□□□ -2.08
P04224 Gm26280-201ENSMUST00000157096 101 ntBASIC2.05□□□□□ -2.08
P04224 Gm23858-201ENSMUST00000158384 106 ntBASIC2.05□□□□□ -2.08
P04224 Gm24771-201ENSMUST00000158508 137 ntBASIC2.05□□□□□ -2.08
P04224 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.05□□□□□ -2.08
P04224 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
P04224 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.05□□□□□ -2.08
P04224 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
P04224 Gm27410-201ENSMUST00000183851 115 ntBASIC2.05□□□□□ -2.08
P04224 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P04224 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P04224 Gm43217-201ENSMUST00000199513 367 ntBASIC2.05□□□□□ -2.08
P04224 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.05□□□□□ -2.08
P04224 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.05□□□□□ -2.08
P04224 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.05□□□□□ -2.08
P04224 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.05□□□□□ -2.08
P04224 Gm10025-201ENSMUST00000079568 372 ntBASIC2.05□□□□□ -2.08
P04224 Gm24977-201ENSMUST00000083106 163 ntBASIC2.05□□□□□ -2.08
P04224 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
P04224 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.05□□□□□ -2.08
P04224 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
P04224 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
P04224 Gm24127-201ENSMUST00000104110 130 ntBASIC2.04□□□□□ -2.08
P04224 Gm26249-201ENSMUST00000116708 118 ntBASIC2.04□□□□□ -2.08
P04224 Gm11798-201ENSMUST00000119150 421 ntBASIC2.04□□□□□ -2.08
P04224 Gm11254-201ENSMUST00000122368 653 ntBASIC2.04□□□□□ -2.08
P04224 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.04□□□□□ -2.08
P04224 Gm23983-201ENSMUST00000157142 114 ntBASIC2.04□□□□□ -2.08
P04224 Gm22792-201ENSMUST00000157225 133 ntBASIC2.04□□□□□ -2.08
P04224 Gm22338-201ENSMUST00000157715 129 ntBASIC2.04□□□□□ -2.08
P04224 Gm26005-201ENSMUST00000158802 134 ntBASIC2.04□□□□□ -2.08
P04224 Snord43-201ENSMUST00000199549 108 ntBASIC2.04□□□□□ -2.08
P04224 Gm43865-201ENSMUST00000204721 127 ntBASIC2.04□□□□□ -2.08
P04224 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.04□□□□□ -2.08
P04224 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.04□□□□□ -2.08
P04224 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.04□□□□□ -2.08
P04224 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
P04224 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.04□□□□□ -2.08
P04224 Gm25628-201ENSMUST00000084002 105 ntBASIC2.04□□□□□ -2.08
P04224 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
P04224 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
P04224 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.03□□□□□ -2.08
P04224 Mir872-201ENSMUST00000104728 81 ntBASIC2.03□□□□□ -2.08
P04224 Gm14296-202ENSMUST00000108931 750 ntBASIC2.03□□□□□ -2.08
P04224 Gm14894-201ENSMUST00000117170 270 ntBASIC2.03□□□□□ -2.08
P04224 Gm12351-201ENSMUST00000118727 292 ntBASIC2.03□□□□□ -2.08
P04224 Gm14972-201ENSMUST00000121780 364 ntBASIC2.03□□□□□ -2.08
P04224 Gm23435-201ENSMUST00000157183 156 ntBASIC2.03□□□□□ -2.08
P04224 Gm23865-201ENSMUST00000157723 97 ntBASIC2.03□□□□□ -2.08
P04224 Gm24212-201ENSMUST00000158258 132 ntBASIC2.03□□□□□ -2.08
P04224 Gm24210-201ENSMUST00000158263 133 ntBASIC2.03□□□□□ -2.08
P04224 Gm25490-201ENSMUST00000158734 130 ntBASIC2.03□□□□□ -2.08
P04224 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.03□□□□□ -2.08
P04224 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
P04224 Gm22367-201ENSMUST00000178930 132 ntBASIC2.03□□□□□ -2.08
P04224 Gm26200-201ENSMUST00000180273 79 ntBASIC2.03□□□□□ -2.08
P04224 Gm29005-201ENSMUST00000186773 320 ntBASIC2.03□□□□□ -2.08
P04224 Gm37449-201ENSMUST00000193016 270 ntBASIC2.03□□□□□ -2.08
P04224 Gm18658-201ENSMUST00000195558 270 ntBASIC2.03□□□□□ -2.08
P04224 Gm44010-201ENSMUST00000204432 331 ntBASIC2.03□□□□□ -2.08
P04224 Gm44655-201ENSMUST00000207768 423 ntBASIC2.03□□□□□ -2.08
P04224 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
P04224 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.03□□□□□ -2.08
P04224 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.03□□□□□ -2.08
P04224 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.03□□□□□ -2.08
P04224 Mir107-201ENSMUST00000083660 87 ntBASIC2.03□□□□□ -2.08
P04224 Gm13443-201ENSMUST00000120770 555 ntBASIC2.02□□□□□ -2.09
P04224 Gm16510-201ENSMUST00000153501 249 ntBASIC2.02□□□□□ -2.09
P04224 Gm23469-201ENSMUST00000157131 104 ntBASIC2.02□□□□□ -2.09
P04224 Gm25113-201ENSMUST00000157185 143 ntBASIC2.02□□□□□ -2.09
P04224 Gm22731-201ENSMUST00000158086 94 ntBASIC2.02□□□□□ -2.09
P04224 Gm24348-201ENSMUST00000158710 130 ntBASIC2.02□□□□□ -2.09
P04224 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
P04224 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.02□□□□□ -2.09
P04224 Gm24333-201ENSMUST00000175101 84 ntBASIC2.02□□□□□ -2.09
P04224 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm28995-201ENSMUST00000186625 261 ntBASIC2.02□□□□□ -2.09
P04224 Gm18357-201ENSMUST00000188184 580 ntBASIC2.02□□□□□ -2.09
P04224 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
P04224 Gm38109-201ENSMUST00000195386 181 ntBASIC2.02□□□□□ -2.09
P04224 Mir3961-201ENSMUST00000198795 59 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms