Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm25834-201ENSMUST00000158916 101 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Vti1aO89116 Gm22910-201ENSMUST00000178568 132 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vti1aO89116 Gm27374-201ENSMUST00000183660 81 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Gm29005-201ENSMUST00000186773 320 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Gm44476-201ENSMUST00000196225 91 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Mir3068-202ENSMUST00000197755 79 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Gm44429-201ENSMUST00000203542 186 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Vti1aO89116 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Vti1aO89116 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.63□□□□□ -1.83
Vti1aO89116 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Vti1aO89116 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.63□□□□□ -1.83
Vti1aO89116 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vti1aO89116 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Vti1aO89116 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vti1aO89116 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vti1aO89116 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Vti1aO89116 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Vti1aO89116 Snord14c-201ENSMUST00000101927 86 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm23183-201ENSMUST00000122595 323 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm27396-201ENSMUST00000157708 58 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm25015-201ENSMUST00000158400 128 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm23476-201ENSMUST00000158881 274 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm17052-201ENSMUST00000165496 289 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm27271-201ENSMUST00000183509 170 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm28627-201ENSMUST00000186141 453 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Trbv6-201ENSMUST00000193743 276 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Gm23723-201ENSMUST00000082996 132 ntBASIC3.62□□□□□ -1.83
Vti1aO89116 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vti1aO89116 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Vti1aO89116 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Vti1aO89116 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Vti1aO89116 Gm23202-201ENSMUST00000104376 129 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm15282-201ENSMUST00000117707 300 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm13167-201ENSMUST00000118554 578 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm24908-201ENSMUST00000157294 127 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vti1aO89116 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Vti1aO89116 Gm37428-201ENSMUST00000193886 137 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.61□□□□□ -1.83
Vti1aO89116 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm22978-201ENSMUST00000082607 160 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm23462-201ENSMUST00000083264 104 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.61□□□□□ -1.83
Vti1aO89116 Gm23747-201ENSMUST00000104228 131 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm26249-201ENSMUST00000116708 118 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm24594-201ENSMUST00000122502 99 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm26026-201ENSMUST00000122726 123 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm24627-201ENSMUST00000122764 138 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vti1aO89116 Gm22883-201ENSMUST00000157376 106 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm24878-201ENSMUST00000158782 104 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Mir6399-201ENSMUST00000184050 84 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm27761-201ENSMUST00000184091 131 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Mir7k-201ENSMUST00000184115 110 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.6□□□□□ -1.83
Vti1aO89116 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.6□□□□□ -1.83
Vti1aO89116 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.6□□□□□ -1.83
Vti1aO89116 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Vti1aO89116 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Vti1aO89116 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Vti1aO89116 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Vti1aO89116 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm14215-201ENSMUST00000120578 221 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.59□□□□□ -1.83
Vti1aO89116 Gm24846-201ENSMUST00000158033 108 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm22538-201ENSMUST00000158169 299 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm4468-201ENSMUST00000170206 294 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm29167-201ENSMUST00000190024 377 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm43932-201ENSMUST00000204499 52 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.59□□□□□ -1.83
Vti1aO89116 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.59□□□□□ -1.83
Vti1aO89116 Gm24966-201ENSMUST00000082443 79 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm23678-201ENSMUST00000083157 107 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Vti1aO89116 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Vti1aO89116 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Vti1aO89116 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.59□□□□□ -1.83
Vti1aO89116 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.59□□□□□ -1.84
Vti1aO89116 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Vti1aO89116 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm25308-201ENSMUST00000104171 158 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Snord19-201ENSMUST00000104609 76 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm16032-201ENSMUST00000118534 168 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm25428-201ENSMUST00000157608 114 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm17067-202ENSMUST00000180131 123 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vti1aO89116 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Gm43220-201ENSMUST00000199299 282 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.58□□□□□ -1.84
Vti1aO89116 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Vti1aO89116 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.58□□□□□ -1.84
Vti1aO89116 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms