Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm18356-201ENSMUST00000185677 623 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ClppO88696 Gm37923-201ENSMUST00000191624 161 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.01□□□□□ -2.09
ClppO88696 Gm43739-201ENSMUST00000198294 307 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm44182-201ENSMUST00000204052 115 ntBASIC2.01□□□□□ -2.09
ClppO88696 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.01□□□□□ -2.09
ClppO88696 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.01□□□□□ -2.09
ClppO88696 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ClppO88696 Gm26457-201ENSMUST00000082678 78 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm24165-201ENSMUST00000082718 128 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm3867-201ENSMUST00000086108 279 ntBASIC2.01□□□□□ -2.09
ClppO88696 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ClppO88696 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
ClppO88696 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2□□□□□ -2.09
ClppO88696 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ClppO88696 Gm38388-201ENSMUST00000195569 1430 ntBASIC2□□□□□ -2.09
ClppO88696 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
ClppO88696 Gm22656-201ENSMUST00000104199 171 ntBASIC2□□□□□ -2.09
ClppO88696 Gm15030-201ENSMUST00000119804 484 ntBASIC2□□□□□ -2.09
ClppO88696 Trav20-201ENSMUST00000142754 347 ntBASIC2□□□□□ -2.09
ClppO88696 Gm22654-201ENSMUST00000157874 105 ntBASIC2□□□□□ -2.09
ClppO88696 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ClppO88696 Gm28925-201ENSMUST00000188586 168 ntBASIC2□□□□□ -2.09
ClppO88696 Gm37845-201ENSMUST00000194977 355 ntBASIC2□□□□□ -2.09
ClppO88696 Gm34073-201ENSMUST00000195736 212 ntBASIC2□□□□□ -2.09
ClppO88696 Gm18991-201ENSMUST00000209225 746 ntBASIC2□□□□□ -2.09
ClppO88696 Gm45386-201ENSMUST00000210194 218 ntBASIC2□□□□□ -2.09
ClppO88696 AC158597.1-201ENSMUST00000216234 150 ntBASIC2□□□□□ -2.09
ClppO88696 AC164297.3-201ENSMUST00000224238 94 ntBASIC2□□□□□ -2.09
ClppO88696 Gm24037-201ENSMUST00000082871 180 ntBASIC2□□□□□ -2.09
ClppO88696 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2□□□□□ -2.09
ClppO88696 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ClppO88696 Gm23950-201ENSMUST00000104026 129 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm24172-201ENSMUST00000104127 117 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm15010-201ENSMUST00000117153 407 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm15215-201ENSMUST00000117773 489 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm13475-201ENSMUST00000119290 234 ntBASIC1.99□□□□□ -2.09
ClppO88696 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ClppO88696 Gm23169-201ENSMUST00000157157 112 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm24769-201ENSMUST00000158506 129 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm25488-201ENSMUST00000158728 118 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm25457-201ENSMUST00000179509 107 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.99□□□□□ -2.09
ClppO88696 Gm27991-201ENSMUST00000184804 137 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ClppO88696 Gm44128-201ENSMUST00000204909 219 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm45315-201ENSMUST00000209283 333 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.99□□□□□ -2.09
ClppO88696 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.99□□□□□ -2.09
ClppO88696 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm23453-201ENSMUST00000083326 106 ntBASIC1.99□□□□□ -2.09
ClppO88696 Gm26066-201ENSMUST00000083385 109 ntBASIC1.99□□□□□ -2.09
ClppO88696 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
ClppO88696 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
ClppO88696 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.99□□□□□ -2.09
ClppO88696 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.98□□□□□ -2.09
ClppO88696 Mir701-201ENSMUST00000102208 109 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm24338-201ENSMUST00000104205 127 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm22678-201ENSMUST00000116974 101 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm14269-201ENSMUST00000120455 306 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.98□□□□□ -2.09
ClppO88696 Gm15692-201ENSMUST00000152173 352 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm23048-201ENSMUST00000157237 129 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm23381-201ENSMUST00000157676 94 ntBASIC1.98□□□□□ -2.09
ClppO88696 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.98□□□□□ -2.09
ClppO88696 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ClppO88696 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.98□□□□□ -2.09
ClppO88696 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ClppO88696 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ClppO88696 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.98□□□□□ -2.09
ClppO88696 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.98□□□□□ -2.09
ClppO88696 Gm44794-201ENSMUST00000206550 411 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm45754-201ENSMUST00000212380 279 ntBASIC1.98□□□□□ -2.09
ClppO88696 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.98□□□□□ -2.09
ClppO88696 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ClppO88696 Gm24623-201ENSMUST00000082616 194 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm23462-201ENSMUST00000083264 104 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm25207-201ENSMUST00000093745 107 ntBASIC1.98□□□□□ -2.09
ClppO88696 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.98□□□□□ -2.09
ClppO88696 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ClppO88696 Gm11512-201ENSMUST00000119669 663 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm14287-201ENSMUST00000121060 117 ntBASIC1.97□□□□□ -2.09
ClppO88696 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm25625-201ENSMUST00000157221 96 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm26345-201ENSMUST00000157534 120 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm25711-201ENSMUST00000158633 128 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.97□□□□□ -2.09
ClppO88696 Gm24388-201ENSMUST00000177872 107 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm5900-201ENSMUST00000179862 375 ntBASIC1.97□□□□□ -2.09
ClppO88696 Mir6355-201ENSMUST00000183687 106 ntBASIC1.97□□□□□ -2.09
ClppO88696 Mir6376-201ENSMUST00000185149 131 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm37579-201ENSMUST00000194291 142 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ClppO88696 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.97□□□□□ -2.09
ClppO88696 Gm44938-201ENSMUST00000208614 427 ntBASIC1.97□□□□□ -2.09
ClppO88696 Gm40810-201ENSMUST00000219149 253 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms