Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm27505-201ENSMUST00000185071 110 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Gm19257-201ENSMUST00000186121 183 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Gm18357-201ENSMUST00000188184 580 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.6□□□□□ -1.99
Cbx4O55187 Gm44337-201ENSMUST00000196553 114 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.6□□□□□ -1.99
Cbx4O55187 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.6□□□□□ -1.99
Cbx4O55187 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Cbx4O55187 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cbx4O55187 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cbx4O55187 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm12793-201ENSMUST00000119268 292 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm24630-201ENSMUST00000122768 106 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm22814-201ENSMUST00000157452 104 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm24691-201ENSMUST00000157762 140 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm24726-201ENSMUST00000158232 121 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.59□□□□□ -1.99
Cbx4O55187 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm29597-201ENSMUST00000188035 308 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm37807-201ENSMUST00000194310 190 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm44526-201ENSMUST00000204664 121 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Gm23247-201ENSMUST00000083373 107 ntBASIC2.59□□□□□ -1.99
Cbx4O55187 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cbx4O55187 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Cbx4O55187 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.59□□□□□ -2
Cbx4O55187 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Cbx4O55187 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.59□□□□□ -2
Cbx4O55187 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cbx4O55187 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cbx4O55187 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Cbx4O55187 Gm24582-201ENSMUST00000103967 103 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm22658-201ENSMUST00000104196 155 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm23128-201ENSMUST00000104257 132 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm24068-201ENSMUST00000104513 132 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm26341-201ENSMUST00000104561 134 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm14073-201ENSMUST00000117344 381 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm13672-201ENSMUST00000117554 459 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm15211-201ENSMUST00000118932 528 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm25269-201ENSMUST00000122601 104 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm16533-201ENSMUST00000140035 228 ntBASIC2.58□□□□□ -2
Cbx4O55187 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.58□□□□□ -2
Cbx4O55187 Gm24846-201ENSMUST00000158033 108 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm4468-201ENSMUST00000170206 294 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm23355-201ENSMUST00000177614 107 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm23148-201ENSMUST00000180367 107 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm28257-201ENSMUST00000185244 463 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm37713-201ENSMUST00000191746 198 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm23128-202ENSMUST00000196578 133 ntBASIC2.58□□□□□ -2
Cbx4O55187 Gm43286-201ENSMUST00000197420 424 ntBASIC2.58□□□□□ -2
Cbx4O55187 Mir3068-202ENSMUST00000197755 79 ntBASIC2.58□□□□□ -2
Cbx4O55187 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.58□□□□□ -2
Cbx4O55187 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.58□□□□□ -2
Cbx4O55187 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cbx4O55187 Gm25258-201ENSMUST00000083049 107 ntBASIC2.58□□□□□ -2
Cbx4O55187 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.58□□□□□ -2
Cbx4O55187 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cbx4O55187 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cbx4O55187 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cbx4O55187 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cbx4O55187 Gm24122-201ENSMUST00000104107 132 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm13432-201ENSMUST00000118861 241 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm15213-201ENSMUST00000122098 216 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm24629-201ENSMUST00000122762 89 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm26411-201ENSMUST00000157668 107 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm22447-201ENSMUST00000158155 92 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm23852-201ENSMUST00000158376 77 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm26214-201ENSMUST00000158581 107 ntBASIC2.57□□□□□ -2
Cbx4O55187 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm22853-201ENSMUST00000174974 131 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm24308-201ENSMUST00000177773 114 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm27532-201ENSMUST00000183726 113 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm28848-201ENSMUST00000189984 168 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.57□□□□□ -2
Cbx4O55187 Gm42739-201ENSMUST00000200687 226 ntBASIC2.57□□□□□ -2
Cbx4O55187 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.57□□□□□ -2
Cbx4O55187 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.57□□□□□ -2
Cbx4O55187 Gm10025-201ENSMUST00000079568 372 ntBASIC2.57□□□□□ -2
Cbx4O55187 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.57□□□□□ -2
Cbx4O55187 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cbx4O55187 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cbx4O55187 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.57□□□□□ -2
Cbx4O55187 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Cbx4O55187 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Cbx4O55187 Gm11572-201ENSMUST00000119164 120 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm25543-201ENSMUST00000122678 312 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cbx4O55187 Gm25362-201ENSMUST00000158854 105 ntBASIC2.56□□□□□ -2
Cbx4O55187 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cbx4O55187 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm22951-201ENSMUST00000179471 107 ntBASIC2.56□□□□□ -2
Cbx4O55187 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm45296-201ENSMUST00000209625 205 ntBASIC2.56□□□□□ -2
Cbx4O55187 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm4945-201ENSMUST00000075152 453 ntBASIC2.56□□□□□ -2
Cbx4O55187 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms