Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm22765-201ENSMUST00000158371 128 ntBASIC0.64□□□□□ -2.31
DffaO54786 Gm25901-201ENSMUST00000158494 130 ntBASIC0.64□□□□□ -2.31
DffaO54786 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.64□□□□□ -2.31
DffaO54786 Gm20438-201ENSMUST00000174441 329 ntBASIC0.64□□□□□ -2.31
DffaO54786 Mir6382-201ENSMUST00000184055 110 ntBASIC0.64□□□□□ -2.31
DffaO54786 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.64□□□□□ -2.31
DffaO54786 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.64□□□□□ -2.31
DffaO54786 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
DffaO54786 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.64□□□□□ -2.31
DffaO54786 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.64□□□□□ -2.31
DffaO54786 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
DffaO54786 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
DffaO54786 Gm23015-201ENSMUST00000104145 128 ntBASIC0.63□□□□□ -2.31
DffaO54786 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.63□□□□□ -2.31
DffaO54786 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm26150-201ENSMUST00000157426 151 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm23032-201ENSMUST00000157995 107 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm20613-201ENSMUST00000175828 345 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
DffaO54786 Gm27656-201ENSMUST00000185055 80 ntBASIC0.63□□□□□ -2.31
DffaO54786 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm37361-201ENSMUST00000194345 132 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm42958-201ENSMUST00000197595 318 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm25820-201ENSMUST00000198589 127 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm44830-201ENSMUST00000207667 584 ntBASIC0.63□□□□□ -2.31
DffaO54786 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.63□□□□□ -2.31
DffaO54786 Platr25-208ENSMUST00000222602 939 ntBASIC0.63□□□□□ -2.31
DffaO54786 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DffaO54786 Gm25589-201ENSMUST00000082502 166 ntBASIC0.63□□□□□ -2.31
DffaO54786 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DffaO54786 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DffaO54786 Gm15010-201ENSMUST00000117153 407 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm2768-201ENSMUST00000121062 250 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.62□□□□□ -2.31
DffaO54786 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.62□□□□□ -2.31
DffaO54786 Gm26236-201ENSMUST00000175536 137 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm25312-201ENSMUST00000178972 107 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm28912-201ENSMUST00000189001 234 ntBASIC0.62□□□□□ -2.31
DffaO54786 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.62□□□□□ -2.31
DffaO54786 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm25799-201ENSMUST00000082643 107 ntBASIC0.62□□□□□ -2.31
DffaO54786 Snord118-201ENSMUST00000082965 135 ntBASIC0.62□□□□□ -2.31
DffaO54786 Gm15175-201ENSMUST00000117629 132 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm14013-201ENSMUST00000119006 270 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm14551-201ENSMUST00000120802 256 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm25059-201ENSMUST00000157367 117 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm23078-201ENSMUST00000157848 148 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm23419-201ENSMUST00000175523 84 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm21815-201ENSMUST00000178213 664 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm25156-201ENSMUST00000179809 79 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm28560-201ENSMUST00000186091 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm28334-201ENSMUST00000186653 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm28495-201ENSMUST00000188452 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm28232-201ENSMUST00000188683 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.61□□□□□ -2.31
DffaO54786 Gm28481-201ENSMUST00000189231 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm29059-201ENSMUST00000191534 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm37765-201ENSMUST00000192395 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm37237-201ENSMUST00000192893 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm36968-201ENSMUST00000193737 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm38290-201ENSMUST00000195238 315 ntBASIC0.61□□□□□ -2.31
DffaO54786 Trdv3-201ENSMUST00000198551 309 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm43406-201ENSMUST00000200356 334 ntBASIC0.61□□□□□ -2.31
DffaO54786 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm26224-201ENSMUST00000082506 80 ntBASIC0.61□□□□□ -2.31
DffaO54786 Gm24536-201ENSMUST00000083144 107 ntBASIC0.61□□□□□ -2.31
DffaO54786 Mir216a-201ENSMUST00000083605 72 ntBASIC0.61□□□□□ -2.31
DffaO54786 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
DffaO54786 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm16412-201ENSMUST00000121602 273 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm24892-201ENSMUST00000122747 104 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm23829-201ENSMUST00000157392 270 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm24960-201ENSMUST00000157923 90 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm26405-201ENSMUST00000158495 100 ntBASIC0.6□□□□□ -2.31
DffaO54786 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm24713-201ENSMUST00000178850 107 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm25448-201ENSMUST00000180065 107 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm27974-201ENSMUST00000183415 105 ntBASIC0.6□□□□□ -2.31
DffaO54786 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm8151-201ENSMUST00000184817 871 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm28666-201ENSMUST00000186649 274 ntBASIC0.6□□□□□ -2.31
DffaO54786 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm43004-201ENSMUST00000201872 703 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm23102-201ENSMUST00000083724 116 ntBASIC0.6□□□□□ -2.31
DffaO54786 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
DffaO54786 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
DffaO54786 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
DffaO54786 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
DffaO54786 Gm16265-201ENSMUST00000134558 108 ntBASIC0.59□□□□□ -2.31
DffaO54786 Gm2020-201ENSMUST00000145242 579 ntBASIC0.59□□□□□ -2.31
DffaO54786 Gm22929-201ENSMUST00000175517 107 ntBASIC0.59□□□□□ -2.31
DffaO54786 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms