Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm22075-201ENSMUST00000158599 192 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm22584-201ENSMUST00000177935 92 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Mir6419-201ENSMUST00000184784 113 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm29216-201ENSMUST00000187117 492 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm10193-201ENSMUST00000188288 231 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm42509-201ENSMUST00000197390 781 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm43583-201ENSMUST00000199235 303 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm22810-201ENSMUST00000082741 158 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm24431-201ENSMUST00000104073 66 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm14972-201ENSMUST00000121780 364 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm14765-201ENSMUST00000121954 326 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.8□□□□□ -2.28
Sdc4O35988 Gm23641-201ENSMUST00000157857 101 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm15914-201ENSMUST00000161922 309 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm17154-201ENSMUST00000165748 431 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm23355-201ENSMUST00000177614 107 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Sdc4O35988 Gm24388-201ENSMUST00000177872 107 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm27640-201ENSMUST00000184580 147 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm10297-201ENSMUST00000207136 651 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm18854-201ENSMUST00000211196 329 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm26446-201ENSMUST00000082455 103 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Gm23721-201ENSMUST00000083005 107 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Mir221-201ENSMUST00000083488 95 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Mir10b-201ENSMUST00000083566 68 ntBASIC0.8□□□□□ -2.28
Sdc4O35988 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Sdc4O35988 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.8□□□□□ -2.28
Sdc4O35988 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.8□□□□□ -2.28
Sdc4O35988 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm22689-201ENSMUST00000102452 110 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Mir467h-201ENSMUST00000116759 121 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm14887-201ENSMUST00000119522 663 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm22186-201ENSMUST00000157822 122 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm23068-201ENSMUST00000158239 293 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm25901-201ENSMUST00000158494 130 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Snora24-201ENSMUST00000174989 130 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Mir3109-201ENSMUST00000175301 88 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm23090-201ENSMUST00000177331 78 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Mir7039-201ENSMUST00000183852 85 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm43250-201ENSMUST00000196536 273 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm9402-201ENSMUST00000196849 388 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm29848-201ENSMUST00000203107 295 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.79□□□□□ -2.28
Sdc4O35988 Gm45907-201ENSMUST00000213023 193 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.79□□□□□ -2.28
Sdc4O35988 Snora41-201ENSMUST00000082668 132 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm26263-201ENSMUST00000083281 164 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Gm23503-201ENSMUST00000083903 107 ntBASIC0.79□□□□□ -2.28
Sdc4O35988 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Sdc4O35988 Gm23744-201ENSMUST00000104231 149 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm11572-201ENSMUST00000119164 120 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm23118-201ENSMUST00000122657 187 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm22038-201ENSMUST00000157277 242 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.78□□□□□ -2.28
Sdc4O35988 Mir28b-201ENSMUST00000175399 80 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm20630-201ENSMUST00000177387 551 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm25361-201ENSMUST00000179358 76 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm43680-201ENSMUST00000199466 340 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm44301-201ENSMUST00000200362 143 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.78□□□□□ -2.28
Sdc4O35988 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Gm23299-201ENSMUST00000082708 79 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Mir344-201ENSMUST00000083634 95 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 Mir465-201ENSMUST00000093563 74 ntBASIC0.78□□□□□ -2.28
Sdc4O35988 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.78□□□□□ -2.29
Sdc4O35988 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Sdc4O35988 Gm22544-201ENSMUST00000104349 127 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm15365-201ENSMUST00000122392 300 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm25423-201ENSMUST00000157609 107 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm24713-201ENSMUST00000178850 107 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm25448-201ENSMUST00000180065 107 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm28439-201ENSMUST00000187714 876 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm5116-201ENSMUST00000187732 463 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm29627-201ENSMUST00000187984 463 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm38323-201ENSMUST00000192450 210 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.77□□□□□ -2.29
Sdc4O35988 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm45590-201ENSMUST00000209715 262 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.77□□□□□ -2.29
Sdc4O35988 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm24920-201ENSMUST00000083018 85 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Mir340-201ENSMUST00000083483 98 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Rny1-201ENSMUST00000083767 112 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.77□□□□□ -2.29
Sdc4O35988 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Sdc4O35988 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.76□□□□□ -2.29
Sdc4O35988 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms