Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.52□□□□□ -2.01
Clk3O35492 Gm9174-201ENSMUST00000078149 255 ntBASIC2.52□□□□□ -2.01
Clk3O35492 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm23406-201ENSMUST00000082537 122 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm26458-201ENSMUST00000082832 128 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm22685-201ENSMUST00000082848 106 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm23462-201ENSMUST00000083264 104 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm23731-201ENSMUST00000083749 107 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Clk3O35492 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Clk3O35492 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Clk3O35492 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Clk3O35492 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Clk3O35492 Gm24590-201ENSMUST00000116699 119 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm12646-201ENSMUST00000119144 238 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm12793-201ENSMUST00000119268 292 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm5396-201ENSMUST00000121222 532 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm23391-201ENSMUST00000157579 104 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm24082-201ENSMUST00000175175 83 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Clk3O35492 Gm28358-202ENSMUST00000189292 223 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm28744-201ENSMUST00000189939 340 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm29490-201ENSMUST00000190923 342 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.51□□□□□ -2.01
Clk3O35492 Gm44024-201ENSMUST00000203008 476 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm44478-201ENSMUST00000204875 114 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm45445-201ENSMUST00000209586 232 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.51□□□□□ -2.01
Clk3O35492 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Gm25793-201ENSMUST00000083287 107 ntBASIC2.51□□□□□ -2.01
Clk3O35492 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.51□□□□□ -2.01
Clk3O35492 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Clk3O35492 Gm14602-201ENSMUST00000118625 340 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Gm23867-201ENSMUST00000122649 274 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Gm26186-201ENSMUST00000157689 125 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Gm24388-201ENSMUST00000177872 107 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Gm27379-201ENSMUST00000183730 123 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.5□□□□□ -2.01
Clk3O35492 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.5□□□□□ -2.01
Clk3O35492 Gm43583-201ENSMUST00000199235 303 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.5□□□□□ -2.01
Clk3O35492 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Clk3O35492 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.5□□□□□ -2.01
Clk3O35492 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.5□□□□□ -2.01
Clk3O35492 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.5□□□□□ -2.01
Clk3O35492 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.5□□□□□ -2.01
Clk3O35492 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Clk3O35492 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Clk3O35492 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Clk3O35492 Gm25168-201ENSMUST00000104189 132 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Clk3O35492 Gm12647-201ENSMUST00000118977 265 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm12924-201ENSMUST00000121747 318 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.49□□□□□ -2.01
Clk3O35492 DQ267100-201ENSMUST00000122600 72 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm22141-201ENSMUST00000157403 277 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm24958-201ENSMUST00000158009 97 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm22447-201ENSMUST00000158155 92 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm24348-201ENSMUST00000158710 130 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.49□□□□□ -2.01
Clk3O35492 Gm25457-201ENSMUST00000179509 107 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Gm28257-201ENSMUST00000185244 463 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Mir7227-201ENSMUST00000200408 59 ntBASIC2.49□□□□□ -2.01
Clk3O35492 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.49□□□□□ -2.01
Clk3O35492 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.49□□□□□ -2.01
Clk3O35492 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Clk3O35492 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Clk3O35492 Gm10025-201ENSMUST00000079568 372 ntBASIC2.49□□□□□ -2.01
Clk3O35492 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Clk3O35492 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Clk3O35492 Gm23128-201ENSMUST00000104257 132 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm25543-201ENSMUST00000122678 312 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.48□□□□□ -2.01
Clk3O35492 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.48□□□□□ -2.01
Clk3O35492 Gm25625-201ENSMUST00000157221 96 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm25280-201ENSMUST00000157269 101 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm22114-201ENSMUST00000177756 107 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm24308-201ENSMUST00000177773 114 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm24799-201ENSMUST00000178431 79 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm23190-201ENSMUST00000180307 64 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Mir7k-201ENSMUST00000184115 110 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm23128-202ENSMUST00000196578 133 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Mir7661-201ENSMUST00000197023 61 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm43035-201ENSMUST00000197626 517 ntBASIC2.48□□□□□ -2.01
Clk3O35492 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.48□□□□□ -2.01
Clk3O35492 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.48□□□□□ -2.01
Clk3O35492 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Snord104-201ENSMUST00000083192 70 ntBASIC2.48□□□□□ -2.01
Clk3O35492 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.47□□□□□ -2.01
Clk3O35492 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.47□□□□□ -2.01
Clk3O35492 Snora36b-201ENSMUST00000104383 132 ntBASIC2.47□□□□□ -2.01
Clk3O35492 Gm13432-201ENSMUST00000118861 241 ntBASIC2.47□□□□□ -2.01
Clk3O35492 Gm24892-201ENSMUST00000122747 104 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms