Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm14678-201ENSMUST00000121396 482 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm25325-201ENSMUST00000122559 86 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm24632-201ENSMUST00000122770 323 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm17054-201ENSMUST00000169811 259 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm37727-201ENSMUST00000191637 819 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm44954-201ENSMUST00000208513 227 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Snord14a-201ENSMUST00000082807 87 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm24921-201ENSMUST00000083024 107 ntBASIC1.1□□□□□ -2.23
Chd3B1AR17 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Chd3B1AR17 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Chd3B1AR17 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm22217-201ENSMUST00000157556 313 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm25333-201ENSMUST00000158035 246 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm6660-201ENSMUST00000179149 468 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm45456-201ENSMUST00000210841 243 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm23462-201ENSMUST00000083264 104 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Gm23245-201ENSMUST00000083370 135 ntBASIC1.09□□□□□ -2.23
Chd3B1AR17 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Chd3B1AR17 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm23744-201ENSMUST00000104231 149 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm23907-201ENSMUST00000104595 189 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm13368-201ENSMUST00000122443 430 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm24598-201ENSMUST00000122510 74 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm22731-201ENSMUST00000158086 94 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Mir3964-201ENSMUST00000174898 74 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm26435-201ENSMUST00000179026 107 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Mir6341-201ENSMUST00000183490 121 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm21064-202ENSMUST00000190583 278 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Mir3068-202ENSMUST00000197755 79 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm22062-201ENSMUST00000082563 107 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm26493-201ENSMUST00000083155 136 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Mir101a-201ENSMUST00000083517 83 ntBASIC1.09□□□□□ -2.24
Chd3B1AR17 Gm22597-201ENSMUST00000157602 80 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm28151-201ENSMUST00000189404 951 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm37757-201ENSMUST00000193072 210 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm42164-201ENSMUST00000198881 379 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm31230-201ENSMUST00000199725 785 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm9973-202ENSMUST00000220926 166 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm26265-201ENSMUST00000083277 135 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm22974-201ENSMUST00000083301 103 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm23435-201ENSMUST00000157183 156 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm22038-201ENSMUST00000157277 242 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm26089-201ENSMUST00000157898 107 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm15914-201ENSMUST00000161922 309 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Traj60-201ENSMUST00000167781 54 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Mir3057-201ENSMUST00000175040 91 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Mir28b-201ENSMUST00000175399 80 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm4076-201ENSMUST00000179230 965 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.08□□□□□ -2.24
Chd3B1AR17 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.08□□□□□ -2.24
Chd3B1AR17 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Chd3B1AR17 Gm22678-201ENSMUST00000116974 101 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm24915-201ENSMUST00000157288 78 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm26358-201ENSMUST00000158215 97 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm7953-201ENSMUST00000168278 469 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Chd3B1AR17 Mir7683-201ENSMUST00000183842 61 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Mir6388-201ENSMUST00000184417 75 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm38213-201ENSMUST00000193203 173 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Gm44254-201ENSMUST00000204184 322 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.07□□□□□ -2.24
Chd3B1AR17 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm24480-201ENSMUST00000157442 103 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm28283-201ENSMUST00000185509 178 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm28862-201ENSMUST00000188246 163 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.06□□□□□ -2.24
Chd3B1AR17 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Chd3B1AR17 Snora3-201ENSMUST00000083082 132 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm15659-201ENSMUST00000118881 341 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm13804-201ENSMUST00000119552 172 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm15365-201ENSMUST00000122392 300 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm16129-201ENSMUST00000152628 486 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm23829-201ENSMUST00000157392 270 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm24942-201ENSMUST00000158328 114 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.06□□□□□ -2.24
Chd3B1AR17 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm9402-201ENSMUST00000196849 388 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Gm22980-201ENSMUST00000082608 70 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Mir452-201ENSMUST00000093629 85 ntBASIC1.06□□□□□ -2.24
Chd3B1AR17 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Chd3B1AR17 Gm24430-201ENSMUST00000104077 104 ntBASIC1.05□□□□□ -2.24
Chd3B1AR17 Gm12417-201ENSMUST00000119153 403 ntBASIC1.05□□□□□ -2.24
Chd3B1AR17 Gm23000-201ENSMUST00000157083 139 ntBASIC1.05□□□□□ -2.24
Chd3B1AR17 Mir1967-201ENSMUST00000157789 82 ntBASIC1.05□□□□□ -2.24
Chd3B1AR17 Gm23078-201ENSMUST00000157848 148 ntBASIC1.05□□□□□ -2.24
Chd3B1AR17 Gm24323-201ENSMUST00000175342 77 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms