Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm25088-201ENSMUST00000101803 79 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm25283-201ENSMUST00000157272 77 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm5116-201ENSMUST00000187732 463 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm29627-201ENSMUST00000187984 463 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm34139-201ENSMUST00000196166 294 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm26166-201ENSMUST00000083788 107 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm25683-201ENSMUST00000083940 131 ntBASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm23907-201ENSMUST00000104595 189 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm12507-201ENSMUST00000119155 415 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm12304-201ENSMUST00000120312 385 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm13356-201ENSMUST00000121678 335 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm14972-201ENSMUST00000121780 364 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm2020-201ENSMUST00000145242 579 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm22527-201ENSMUST00000158816 106 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Mir28b-201ENSMUST00000175399 80 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm44128-201ENSMUST00000204909 219 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm11389-201ENSMUST00000121407 430 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm24594-201ENSMUST00000122502 99 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm24784-201ENSMUST00000157640 62 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm27396-201ENSMUST00000157708 58 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm25371-201ENSMUST00000158162 101 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm8114-201ENSMUST00000172225 484 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm27878-201ENSMUST00000184000 106 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm29613-201ENSMUST00000185846 313 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm28196-201ENSMUST00000187719 640 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm29544-201ENSMUST00000188860 313 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm28808-201ENSMUST00000190978 313 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm44125-201ENSMUST00000203068 448 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm44825-201ENSMUST00000207557 150 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm44598-201ENSMUST00000207566 150 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
Col6a4A2AX52 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Gm25138-201ENSMUST00000083248 136 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Mir224-201ENSMUST00000083608 82 ntBASIC0.56□□□□□ -2.32
Col6a4A2AX52 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm15010-201ENSMUST00000117153 407 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm6568-201ENSMUST00000122274 697 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm24896-201ENSMUST00000122741 135 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm23586-201ENSMUST00000157657 123 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm25981-201ENSMUST00000157921 295 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm24573-201ENSMUST00000175499 112 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm44336-201ENSMUST00000203696 468 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm33654-201ENSMUST00000221704 215 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm25853-201ENSMUST00000082793 132 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC153950.1-201ENSMUST00000219916 3238 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm12370-201ENSMUST00000117809 604 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm14039-201ENSMUST00000118705 101 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm12417-201ENSMUST00000119153 403 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm24777-201ENSMUST00000157644 107 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm22768-201ENSMUST00000158366 153 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm22800-201ENSMUST00000175627 94 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm26285-201ENSMUST00000177923 107 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Mir6399-201ENSMUST00000184050 84 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm9236-201ENSMUST00000196892 587 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm23622-201ENSMUST00000082460 107 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm26203-201ENSMUST00000082911 114 ntBASIC0.55□□□□□ -2.32
Col6a4A2AX52 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.54□□□□□ -2.32
Col6a4A2AX52 Gm15365-201ENSMUST00000122392 300 ntBASIC0.54□□□□□ -2.32
Col6a4A2AX52 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.54□□□□□ -2.32
Col6a4A2AX52 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Col6a4A2AX52 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.54□□□□□ -2.32
Col6a4A2AX52 Gm24476-201ENSMUST00000157437 131 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 335.1 ms