Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm37361-201ENSMUST00000194345 132 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm37089-201ENSMUST00000195616 129 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm42533-201ENSMUST00000196247 157 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm43250-201ENSMUST00000196536 273 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm44429-201ENSMUST00000203542 186 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm43914-201ENSMUST00000203592 594 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm44830-201ENSMUST00000207667 584 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm14943-201ENSMUST00000118056 546 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Gm16265-201ENSMUST00000134558 108 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Gm24942-201ENSMUST00000158328 114 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Mir3964-201ENSMUST00000174898 74 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Mir6355-201ENSMUST00000183687 106 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Gm45382-201ENSMUST00000210607 151 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 DQ267101-201ENSMUST00000082562 73 ntBASIC0.33□□□□□ -2.36
Trav3-4A0A075B654 Gm23766-201ENSMUST00000103894 80 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm12806-201ENSMUST00000119384 268 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm13588-201ENSMUST00000120026 135 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm15177-201ENSMUST00000120491 577 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm14551-201ENSMUST00000120802 256 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm11363-201ENSMUST00000121672 548 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm22221-201ENSMUST00000157362 103 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm23754-201ENSMUST00000157576 63 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm24080-201ENSMUST00000175178 232 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm26236-201ENSMUST00000175536 137 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm20874-201ENSMUST00000178356 663 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm28794-201ENSMUST00000185276 136 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm28412-201ENSMUST00000187243 177 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm38149-201ENSMUST00000191943 339 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 Gm24254-201ENSMUST00000083702 104 ntBASIC0.32□□□□□ -2.36
Trav3-4A0A075B654 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm26484-201ENSMUST00000158018 106 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Mir5104-201ENSMUST00000175319 94 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm22716-201ENSMUST00000177596 107 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Mir7225-201ENSMUST00000184178 54 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm42834-201ENSMUST00000196845 256 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm44465-201ENSMUST00000199536 114 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm24311-201ENSMUST00000082570 104 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm24977-201ENSMUST00000083106 163 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Snora34-201ENSMUST00000083402 138 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.31□□□□□ -2.36
Trav3-4A0A075B654 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Mir374b-201ENSMUST00000102314 95 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm15010-201ENSMUST00000117153 407 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm11572-201ENSMUST00000119164 120 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm5396-201ENSMUST00000121222 532 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm22796-201ENSMUST00000157234 106 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm22038-201ENSMUST00000157277 242 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm23538-201ENSMUST00000157535 101 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm23589-201ENSMUST00000157660 105 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm22403-201ENSMUST00000174919 84 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm4076-201ENSMUST00000179230 965 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm27428-201ENSMUST00000184289 110 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm27421-201ENSMUST00000184729 167 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Mir6962-201ENSMUST00000199512 63 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm44462-201ENSMUST00000199696 129 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm44976-201ENSMUST00000205543 261 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Mir340-201ENSMUST00000083483 98 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.3□□□□□ -2.36
Trav3-4A0A075B654 Gm23015-201ENSMUST00000104145 128 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm15175-201ENSMUST00000117629 132 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm22482-201ENSMUST00000122563 359 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm24713-201ENSMUST00000178850 107 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm24390-201ENSMUST00000179578 62 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm25448-201ENSMUST00000180065 107 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm25120-201ENSMUST00000180148 79 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm23648-201ENSMUST00000180301 107 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm29661-201ENSMUST00000186781 315 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm29308-201ENSMUST00000188863 315 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm37713-201ENSMUST00000191746 198 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm43432-201ENSMUST00000196352 121 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm43602-201ENSMUST00000196772 300 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.29□□□□□ -2.36
Trav3-4A0A075B654 Gm44408-201ENSMUST00000200205 66 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms