Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm27753-201ENSMUST00000184742 203 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm37313-201ENSMUST00000191673 290 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm37404-201ENSMUST00000195726 359 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm44478-201ENSMUST00000204875 114 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm44654-201ENSMUST00000208052 329 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm23040-201ENSMUST00000083869 163 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm13672-201ENSMUST00000117554 459 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm14770-201ENSMUST00000122197 312 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm23331-201ENSMUST00000157423 108 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm22527-201ENSMUST00000158816 106 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm8292-201ENSMUST00000162574 396 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm22192-201ENSMUST00000175128 85 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm23860-201ENSMUST00000179446 132 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm25121-201ENSMUST00000179846 79 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm19777-201ENSMUST00000191940 358 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm32033-201ENSMUST00000193483 339 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm42570-201ENSMUST00000195937 292 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm43600-201ENSMUST00000202134 223 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm22978-201ENSMUST00000082607 160 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Gm25632-201ENSMUST00000083112 85 ntBASIC1.93□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm14602-201ENSMUST00000118625 340 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm14843-201ENSMUST00000119596 212 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm22843-201ENSMUST00000157710 134 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm22159-201ENSMUST00000158412 130 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm6788-201ENSMUST00000166459 270 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm20462-201ENSMUST00000172623 408 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm26400-201ENSMUST00000175012 85 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm28418-201ENSMUST00000186179 423 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Gm25937-201ENSMUST00000083912 107 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Mir496a-201ENSMUST00000093627 79 ntBASIC1.92□□□□□ -2.1
Trav1A0A075B5Z4 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm23142-201ENSMUST00000101848 105 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm26500-201ENSMUST00000101867 106 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm26240-201ENSMUST00000101893 105 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Mir878-201ENSMUST00000104680 78 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm12550-201ENSMUST00000118478 329 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm11598-201ENSMUST00000119257 357 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm15986-201ENSMUST00000122153 400 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm23120-201ENSMUST00000157654 287 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm29397-201ENSMUST00000185205 333 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Gm25199-201ENSMUST00000083095 104 ntBASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Trav1A0A075B5Z4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.9□□□□□ -2.1
Trav1A0A075B5Z4 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm26015-201ENSMUST00000104402 125 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm11859-201ENSMUST00000118099 455 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm12646-201ENSMUST00000119144 238 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm25269-201ENSMUST00000122601 104 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm24005-201ENSMUST00000158459 296 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm21978-201ENSMUST00000179696 377 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm25284-201ENSMUST00000180345 141 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Mir6355-201ENSMUST00000183687 106 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm27640-201ENSMUST00000184580 147 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm6801-201ENSMUST00000190697 339 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm44337-201ENSMUST00000196553 114 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm44468-201ENSMUST00000199516 105 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm25896-201ENSMUST00000083713 136 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Gm26314-201ENSMUST00000083891 107 ntBASIC1.9□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm24098-201ENSMUST00000102075 109 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm25381-201ENSMUST00000102078 109 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm12304-201ENSMUST00000120312 385 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Gm16355-201ENSMUST00000128606 231 ntBASIC1.89□□□□□ -2.11
Trav1A0A075B5Z4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms