Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm24535-201ENSMUST00000083140 107 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Snord1a-201ENSMUST00000083160 74 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm23520-201ENSMUST00000093736 107 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Snord116l9-201ENSMUST00000101891 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26504-201ENSMUST00000102033 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Mir599-201ENSMUST00000102378 88 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm22338-201ENSMUST00000157715 129 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm23419-201ENSMUST00000175523 84 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26502-201ENSMUST00000177732 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l13-201ENSMUST00000177737 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm25350-201ENSMUST00000177849 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l15-201ENSMUST00000177940 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm23446-201ENSMUST00000177977 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l4-201ENSMUST00000177982 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26201-201ENSMUST00000178047 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm24711-201ENSMUST00000178062 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm24609-201ENSMUST00000178166 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm23265-201ENSMUST00000178321 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm22812-201ENSMUST00000178329 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l3-201ENSMUST00000178370 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26246-201ENSMUST00000178388 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm25155-201ENSMUST00000178450 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm24760-201ENSMUST00000178530 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm22285-201ENSMUST00000178576 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm22417-201ENSMUST00000178656 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l2-201ENSMUST00000178675 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26270-201ENSMUST00000178690 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm23313-201ENSMUST00000178931 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm23089-201ENSMUST00000178947 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm24153-201ENSMUST00000179280 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm25597-201ENSMUST00000179388 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm25816-201ENSMUST00000179764 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26188-201ENSMUST00000179963 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26433-201ENSMUST00000180227 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm22128-201ENSMUST00000180346 94 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.03□□□□□ -2.4
Scn11aQ9R053 Gm26968-201ENSMUST00000182894 481 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 AC127302.1-201ENSMUST00000215973 1111 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 Gm18696-201ENSMUST00000220103 274 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 Gm26328-201ENSMUST00000082821 107 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.02□□□□□ -2.41
Scn11aQ9R053 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Scn11aQ9R053 Gm15861-201ENSMUST00000120979 339 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Mir28b-201ENSMUST00000175399 80 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Gm28755-201ENSMUST00000185773 199 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Gm44128-201ENSMUST00000204909 219 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Gm12392-201ENSMUST00000118014 938 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Mir3961-201ENSMUST00000198795 59 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Gm23727-201ENSMUST00000083352 164 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Mir214-201ENSMUST00000083582 110 ntBASIC0.01□□□□□ -2.41
Scn11aQ9R053 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Scn11aQ9R053 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
Scn11aQ9R053 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28838-201ENSMUST00000186338 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm29635-201ENSMUST00000187221 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm29026-201ENSMUST00000187787 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28797-201ENSMUST00000188543 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28855-201ENSMUST00000188680 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm29600-201ENSMUST00000188687 377 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28705-201ENSMUST00000189548 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28939-201ENSMUST00000190351 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm28223-201ENSMUST00000190469 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm29092-201ENSMUST00000190768 315 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm38208-201ENSMUST00000192476 114 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 AC132104.1-201ENSMUST00000213615 260 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm18039-201ENSMUST00000217816 728 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0□□□□□ -2.41
Scn11aQ9R053 AC122769.2-201ENSMUST00000227248 302 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm25792-201ENSMUST00000083289 100 ntBASIC0□□□□□ -2.41
Scn11aQ9R053 Gm24282-201ENSMUST00000104232 66 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm26102-201ENSMUST00000157251 284 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm22706-201ENSMUST00000157907 112 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm27420-201ENSMUST00000183823 79 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm28191-201ENSMUST00000189112 211 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm37869-201ENSMUST00000193385 595 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Snord82-201ENSMUST00000082889 70 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm12640-201ENSMUST00000120097 310 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Mir6419-201ENSMUST00000184784 113 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms