Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm10105-201ENSMUST00000184601 270 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm37923-201ENSMUST00000191624 161 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm45315-201ENSMUST00000209283 333 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm45403-201ENSMUST00000209453 276 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm24623-201ENSMUST00000082616 194 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Mir344e-201ENSMUST00000104677 66 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm14402-201ENSMUST00000122217 508 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm8292-201ENSMUST00000162574 396 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm43739-201ENSMUST00000198294 307 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Mir378a-201ENSMUST00000198300 66 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Mir3069-201ENSMUST00000198802 65 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Gm43472-201ENSMUST00000200175 154 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.36□□□□□ -2.03
Cpsf3Q9QXK7 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm13913-201ENSMUST00000121126 260 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm25321-201ENSMUST00000122558 102 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm16355-201ENSMUST00000128606 231 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm22080-201ENSMUST00000157591 106 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm27396-201ENSMUST00000157708 58 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm24010-201ENSMUST00000157731 282 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm25454-201ENSMUST00000157947 315 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm24769-201ENSMUST00000158506 129 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm25486-201ENSMUST00000158726 63 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm22093-201ENSMUST00000158980 111 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm22192-201ENSMUST00000175128 85 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm43976-201ENSMUST00000203637 235 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm44687-201ENSMUST00000204975 235 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm25632-201ENSMUST00000083112 85 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm23453-201ENSMUST00000083326 106 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm22866-201ENSMUST00000083947 177 ntBASIC2.35□□□□□ -2.03
Cpsf3Q9QXK7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm24049-201ENSMUST00000102409 100 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm25094-201ENSMUST00000103992 131 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm23551-201ENSMUST00000116852 121 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm25054-201ENSMUST00000157370 97 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm25909-201ENSMUST00000157619 121 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm24853-201ENSMUST00000158026 121 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm16326-201ENSMUST00000162843 414 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm45791-201ENSMUST00000212908 352 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm9318-201ENSMUST00000222444 438 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Gm22364-201ENSMUST00000083097 98 ntBASIC2.34□□□□□ -2.03
Cpsf3Q9QXK7 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Cpsf3Q9QXK7 Gm22037-201ENSMUST00000157280 296 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm25384-201ENSMUST00000157807 105 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm22654-201ENSMUST00000157874 105 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm24857-201ENSMUST00000158061 310 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm25434-201ENSMUST00000158278 167 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm22159-201ENSMUST00000158412 130 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm24499-201ENSMUST00000158446 104 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Snord11-201ENSMUST00000158468 84 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm22947-201ENSMUST00000158559 91 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm9830-201ENSMUST00000178509 357 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm43978-201ENSMUST00000203491 451 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm45704-201ENSMUST00000212582 403 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm10264-201ENSMUST00000220589 429 ntBASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cpsf3Q9QXK7 Mir701-201ENSMUST00000102208 109 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm42606-201ENSMUST00000114209 239 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm14588-201ENSMUST00000119895 172 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm12304-201ENSMUST00000120312 385 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm22073-201ENSMUST00000122668 189 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm23331-201ENSMUST00000157423 108 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm24900-201ENSMUST00000158128 134 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm3027-201ENSMUST00000167579 451 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm24085-201ENSMUST00000175172 116 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm22308-201ENSMUST00000177609 107 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms