Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm20438-201ENSMUST00000174441 329 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm23090-201ENSMUST00000177331 78 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm44446-201ENSMUST00000204864 255 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm24536-201ENSMUST00000083144 107 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm12941-201ENSMUST00000117934 220 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm12417-201ENSMUST00000119153 403 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm22718-201ENSMUST00000122701 315 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm22099-201ENSMUST00000157925 123 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm22263-201ENSMUST00000180060 104 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm44429-201ENSMUST00000203542 186 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm45344-201ENSMUST00000211610 341 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm46312-201ENSMUST00000220961 420 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Snord118-201ENSMUST00000082965 135 ntBASIC1.44□□□□□ -2.18
Trem1Q9JKE2 Gm25279-201ENSMUST00000122608 133 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm23854-201ENSMUST00000158378 108 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm26214-201ENSMUST00000158581 107 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm24174-201ENSMUST00000158933 111 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm29352-201ENSMUST00000188054 544 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm38261-201ENSMUST00000192608 316 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm43556-201ENSMUST00000196186 681 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Gm35212-201ENSMUST00000196672 606 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.43□□□□□ -2.18
Trem1Q9JKE2 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm22818-201ENSMUST00000157446 104 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm23317-201ENSMUST00000157999 129 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Mir3057-201ENSMUST00000175040 91 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm28995-201ENSMUST00000186625 261 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Mir1291-201ENSMUST00000199842 117 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm44533-201ENSMUST00000207782 268 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Snora34-201ENSMUST00000083402 138 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Gm25896-201ENSMUST00000083713 136 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Mir463-201ENSMUST00000093570 75 ntBASIC1.42□□□□□ -2.18
Trem1Q9JKE2 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm23124-201ENSMUST00000157650 107 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm22666-201ENSMUST00000158717 164 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm21815-201ENSMUST00000178213 664 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm22862-201ENSMUST00000178593 121 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm29613-201ENSMUST00000185846 313 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm29544-201ENSMUST00000188860 313 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm28808-201ENSMUST00000190978 313 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm37081-201ENSMUST00000192034 196 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Gm7495-201ENSMUST00000215099 426 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.41□□□□□ -2.18
Trem1Q9JKE2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
Trem1Q9JKE2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trem1Q9JKE2 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trem1Q9JKE2 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm22027-201ENSMUST00000122737 127 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm22963-201ENSMUST00000157960 91 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Mir6419-201ENSMUST00000184784 113 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm27624-201ENSMUST00000185047 177 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Mir7678-201ENSMUST00000185076 71 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm9156-201ENSMUST00000189660 463 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm34073-201ENSMUST00000195736 212 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm44336-201ENSMUST00000203696 468 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm45116-201ENSMUST00000207392 275 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm45207-201ENSMUST00000207469 145 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm10092-201ENSMUST00000077110 180 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm24615-201ENSMUST00000083268 113 ntBASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trem1Q9JKE2 Gm23015-201ENSMUST00000104145 128 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm17113-201ENSMUST00000170118 171 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm22631-201ENSMUST00000179656 94 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms