Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.73□□□□□ -2.29
Trem3Q9JKE1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.73□□□□□ -2.29
Trem3Q9JKE1 Gm25589-201ENSMUST00000082502 166 ntBASIC0.73□□□□□ -2.29
Trem3Q9JKE1 Mir343-201ENSMUST00000102360 75 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm8858-201ENSMUST00000118259 342 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm11891-201ENSMUST00000121241 619 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Mir6355-201ENSMUST00000183687 106 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm37946-201ENSMUST00000192064 347 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm43914-201ENSMUST00000203592 594 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm18691-201ENSMUST00000203593 872 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm18160-201ENSMUST00000214279 827 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Gm25038-201ENSMUST00000082928 130 ntBASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Trem3Q9JKE1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm11363-201ENSMUST00000121672 548 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm23118-201ENSMUST00000122657 187 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm22290-201ENSMUST00000177655 107 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm24754-201ENSMUST00000177997 107 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm22583-201ENSMUST00000178031 107 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm27660-201ENSMUST00000184028 208 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm9156-201ENSMUST00000189660 463 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.71□□□□□ -2.3
Trem3Q9JKE1 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm25128-201ENSMUST00000083339 76 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm24494-201ENSMUST00000083804 81 ntBASIC0.71□□□□□ -2.3
Trem3Q9JKE1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm26074-201ENSMUST00000104063 129 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm12449-201ENSMUST00000117572 234 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm13992-201ENSMUST00000120558 156 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm5396-201ENSMUST00000121222 532 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm22076-201ENSMUST00000158601 84 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm20543-201ENSMUST00000174200 726 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm45456-201ENSMUST00000210841 243 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm25079-201ENSMUST00000082529 203 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.7□□□□□ -2.3
Trem3Q9JKE1 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm22785-201ENSMUST00000104087 132 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23705-201ENSMUST00000104370 130 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm15010-201ENSMUST00000117153 407 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23184-201ENSMUST00000122594 131 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23331-201ENSMUST00000157423 108 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23589-201ENSMUST00000157660 105 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23641-201ENSMUST00000157857 101 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm25371-201ENSMUST00000158162 101 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm26405-201ENSMUST00000158495 100 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm23289-201ENSMUST00000175615 108 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm27587-201ENSMUST00000185116 163 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm45878-201ENSMUST00000211839 241 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trem3Q9JKE1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm23230-201ENSMUST00000157298 133 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm22233-201ENSMUST00000157464 114 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm23893-201ENSMUST00000158106 134 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm25868-201ENSMUST00000158253 114 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm25768-201ENSMUST00000158570 98 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm24221-201ENSMUST00000158833 313 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm10193-201ENSMUST00000188288 231 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm23370-201ENSMUST00000199545 130 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm29848-201ENSMUST00000203107 295 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm18854-201ENSMUST00000211196 329 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Snord118-201ENSMUST00000082965 135 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Snord1a-201ENSMUST00000083160 74 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 Gm23516-201ENSMUST00000093728 107 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.68□□□□□ -2.3
Trem3Q9JKE1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm14931-201ENSMUST00000111079 253 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm24588-201ENSMUST00000116696 83 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm12512-201ENSMUST00000119620 217 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm23317-201ENSMUST00000157999 129 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm43035-201ENSMUST00000197626 517 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms