Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm23851-201ENSMUST00000083831 103 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm22479-201ENSMUST00000122566 81 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm22216-201ENSMUST00000157557 114 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm23476-201ENSMUST00000158881 274 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm8292-201ENSMUST00000162574 396 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Mir5624-201ENSMUST00000176635 61 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm44161-201ENSMUST00000203532 253 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm23453-201ENSMUST00000083326 106 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim54Q9ERP3 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm24282-201ENSMUST00000104232 66 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm6574-201ENSMUST00000120037 362 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm12785-201ENSMUST00000122052 172 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Mir5118-201ENSMUST00000175551 67 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Mir6355-201ENSMUST00000183687 106 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm27330-201ENSMUST00000184689 132 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm29553-201ENSMUST00000189692 279 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm44373-201ENSMUST00000196112 169 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Mir3068-202ENSMUST00000197755 79 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Gm44419-201ENSMUST00000203338 229 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trim54Q9ERP3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trim54Q9ERP3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm23202-201ENSMUST00000104376 129 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm25454-201ENSMUST00000157947 315 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm28408-201ENSMUST00000191557 463 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm42570-201ENSMUST00000195937 292 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm43406-201ENSMUST00000200356 334 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm18346-201ENSMUST00000216782 325 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.79□□□□□ -1.96
Trim54Q9ERP3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm13378-201ENSMUST00000117483 336 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm14761-201ENSMUST00000121363 262 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm14402-201ENSMUST00000122217 508 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm24911-201ENSMUST00000157292 136 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm25642-201ENSMUST00000175137 66 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm22242-201ENSMUST00000175224 118 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm9830-201ENSMUST00000178509 357 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Mir7118-201ENSMUST00000197760 61 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm45207-201ENSMUST00000207469 145 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm26314-201ENSMUST00000083891 107 ntBASIC2.78□□□□□ -1.96
Trim54Q9ERP3 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm26342-201ENSMUST00000104557 129 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm13880-201ENSMUST00000118421 474 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm25392-201ENSMUST00000157335 297 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm25397-201ENSMUST00000176951 92 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm24487-201ENSMUST00000178017 63 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm28995-201ENSMUST00000186625 261 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm28647-201ENSMUST00000188416 197 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm28288-201ENSMUST00000191019 214 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.77□□□□□ -1.97
Trim54Q9ERP3 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim54Q9ERP3 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Gm23847-201ENSMUST00000083829 110 ntBASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim54Q9ERP3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm11322-201ENSMUST00000118095 435 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm12550-201ENSMUST00000118478 329 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm13729-201ENSMUST00000120328 406 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm23262-201ENSMUST00000158323 168 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm22945-201ENSMUST00000158557 157 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms