Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm12370-201ENSMUST00000117809 604 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm12639-201ENSMUST00000121400 493 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm12779-201ENSMUST00000121496 143 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm23981-201ENSMUST00000157136 106 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm23641-201ENSMUST00000157857 101 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm22731-201ENSMUST00000158086 94 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm22733-201ENSMUST00000158094 91 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm23025-201ENSMUST00000158769 111 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm3111-201ENSMUST00000167426 490 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm18417-201ENSMUST00000176564 648 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm43723-201ENSMUST00000196886 189 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm44870-201ENSMUST00000207291 357 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm44910-201ENSMUST00000208451 396 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.25□□□□□ -2.21
Lima1Q9ERG0 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm26228-201ENSMUST00000082512 107 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm25080-201ENSMUST00000082526 107 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm25518-201ENSMUST00000083864 107 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.25□□□□□ -2.21
Lima1Q9ERG0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm23230-201ENSMUST00000157298 133 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm26049-201ENSMUST00000157313 108 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Mir3057-201ENSMUST00000175040 91 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm24518-201ENSMUST00000180275 94 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm18971-201ENSMUST00000197240 374 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm21937-201ENSMUST00000222825 218 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Mir211-201ENSMUST00000083651 106 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gm25409-201ENSMUST00000083764 131 ntBASIC1.24□□□□□ -2.21
Lima1Q9ERG0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Mir582-201ENSMUST00000103758 81 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm25421-201ENSMUST00000104218 164 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm24889-201ENSMUST00000104388 132 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm14366-201ENSMUST00000121970 730 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm14402-201ENSMUST00000122217 508 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm24076-201ENSMUST00000158179 94 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm21754-201ENSMUST00000177550 479 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm27517-201ENSMUST00000184347 236 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm37709-201ENSMUST00000195074 600 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm17906-201ENSMUST00000202480 901 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Gm17990-201ENSMUST00000211728 553 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Lima1Q9ERG0 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm14624-201ENSMUST00000117746 192 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm12806-201ENSMUST00000119384 268 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm22075-201ENSMUST00000158599 192 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Mir3569-201ENSMUST00000185080 58 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm29397-201ENSMUST00000185205 333 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm37727-201ENSMUST00000191637 819 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.22□□□□□ -2.21
Lima1Q9ERG0 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm24079-201ENSMUST00000104352 132 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm12053-201ENSMUST00000119022 252 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm13804-201ENSMUST00000119552 172 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm23124-201ENSMUST00000157650 107 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm25162-201ENSMUST00000158906 159 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm7925-201ENSMUST00000166690 401 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm22851-201ENSMUST00000178741 94 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm25074-201ENSMUST00000178782 94 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Mir6388-201ENSMUST00000184417 75 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms