Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm26105-201ENSMUST00000157253 190 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm23588-201ENSMUST00000157659 99 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm22945-201ENSMUST00000158557 157 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm23008-201ENSMUST00000158946 80 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm24315-201ENSMUST00000177835 127 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm22631-201ENSMUST00000179656 94 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm23523-201ENSMUST00000180190 107 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm25586-201ENSMUST00000082499 112 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm23517-201ENSMUST00000082830 192 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm14670-201ENSMUST00000117327 337 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm24846-201ENSMUST00000158033 108 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm23196-201ENSMUST00000158806 107 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm37658-201ENSMUST00000192672 315 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm22831-201ENSMUST00000102473 109 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm15526-201ENSMUST00000112504 204 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm11522-201ENSMUST00000120533 176 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm22668-201ENSMUST00000158716 260 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm5329-201ENSMUST00000186898 463 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm43286-201ENSMUST00000197420 424 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm44524-201ENSMUST00000203899 271 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Olfr197-201ENSMUST00000080031 926 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm22443-201ENSMUST00000082890 107 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm26175-201ENSMUST00000083794 131 ntBASIC2.04□□□□□ -2.08
Scn4aQ9ER60 Gm13602-201ENSMUST00000122405 493 ntBASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Gm6059-201ENSMUST00000196903 340 ntBASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Mir7217-201ENSMUST00000200304 62 ntBASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Gm10298-201ENSMUST00000074801 265 ntBASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Scn4aQ9ER60 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm23202-201ENSMUST00000104376 129 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm25325-201ENSMUST00000122559 86 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm23331-201ENSMUST00000157423 108 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm24770-201ENSMUST00000158505 92 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm5224-201ENSMUST00000183060 350 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm28169-201ENSMUST00000190342 345 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm37869-201ENSMUST00000193385 595 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Mir691-201ENSMUST00000199719 78 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm22572-201ENSMUST00000082985 105 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Gm23096-201ENSMUST00000083447 107 ntBASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Scn4aQ9ER60 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm12393-201ENSMUST00000117084 848 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm12351-201ENSMUST00000118727 292 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm14551-201ENSMUST00000120802 256 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm25715-201ENSMUST00000158627 125 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm25162-201ENSMUST00000158906 159 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm21673-201ENSMUST00000186640 436 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm21135-201ENSMUST00000189023 436 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm44052-201ENSMUST00000203382 396 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm43978-201ENSMUST00000203491 451 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm26446-201ENSMUST00000082455 103 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Gm25038-201ENSMUST00000082928 130 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Snord14d-201ENSMUST00000083424 86 ntBASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn4aQ9ER60 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm23124-201ENSMUST00000157650 107 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm25768-201ENSMUST00000158570 98 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm24418-201ENSMUST00000177597 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm24639-201ENSMUST00000178518 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm23076-201ENSMUST00000179082 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm25077-201ENSMUST00000179157 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm22771-201ENSMUST00000104449 91 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm14287-201ENSMUST00000121060 117 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm25454-201ENSMUST00000157947 315 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms