Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Mir467h-201ENSMUST00000116759 121 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm26303-201ENSMUST00000116845 119 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm12392-201ENSMUST00000118014 938 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm11813-201ENSMUST00000118586 291 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Scarna8-201ENSMUST00000158333 131 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm27977-201ENSMUST00000185159 111 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm20257-202ENSMUST00000188643 130 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Snord95-201ENSMUST00000082846 68 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.11□□□□□ -2.39
Cpsf1Q9EPU4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Mir6365-201ENSMUST00000183990 101 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Gm28825-201ENSMUST00000186233 238 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Gm44976-201ENSMUST00000205543 261 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Snord1a-201ENSMUST00000083160 74 ntBASIC0.1□□□□□ -2.39
Cpsf1Q9EPU4 Gm25876-201ENSMUST00000104329 119 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm11384-201ENSMUST00000121376 303 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm25393-201ENSMUST00000157336 285 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm23277-201ENSMUST00000157914 136 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Mir28b-201ENSMUST00000175399 80 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm11392-201ENSMUST00000181419 710 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Mir6388-201ENSMUST00000184417 75 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm42719-201ENSMUST00000197393 355 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm45912-201ENSMUST00000210646 543 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Gm24948-201ENSMUST00000082866 207 ntBASIC0.09□□□□□ -2.4
Cpsf1Q9EPU4 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm13482-201ENSMUST00000119842 254 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm25011-201ENSMUST00000158398 126 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm28409-201ENSMUST00000187064 103 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm29575-201ENSMUST00000190597 315 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Mir191-201ENSMUST00000196210 74 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm9795-201ENSMUST00000062156 693 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Mir33-201ENSMUST00000083531 69 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm26327-201ENSMUST00000093724 111 ntBASIC0.08□□□□□ -2.4
Cpsf1Q9EPU4 Gm24582-201ENSMUST00000103967 103 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Gm15309-201ENSMUST00000121644 240 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Gm24366-201ENSMUST00000175383 86 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Gm37713-201ENSMUST00000191746 198 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Gm45374-201ENSMUST00000211388 136 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.07□□□□□ -2.4
Cpsf1Q9EPU4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm13885-201ENSMUST00000117569 187 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm25543-201ENSMUST00000122678 312 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm24851-201ENSMUST00000158028 103 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm27420-201ENSMUST00000183823 79 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm19891-201ENSMUST00000189771 303 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm19326-201ENSMUST00000219818 326 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Cpsf1Q9EPU4 Gm16373-201ENSMUST00000129517 303 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm25283-201ENSMUST00000157272 77 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm44050-201ENSMUST00000204263 527 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm45688-201ENSMUST00000210002 101 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm19709-201ENSMUST00000215403 482 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm25851-201ENSMUST00000082794 107 ntBASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Cpsf1Q9EPU4 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm25914-201ENSMUST00000157618 153 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm17655-201ENSMUST00000167969 255 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm29037-201ENSMUST00000189092 313 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm20102-201ENSMUST00000222445 220 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm26439-201ENSMUST00000082592 106 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm26326-201ENSMUST00000083070 129 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Mir411-201ENSMUST00000083543 82 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm12656-201ENSMUST00000118149 577 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm23792-201ENSMUST00000122557 93 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm17987-201ENSMUST00000206902 603 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm45614-201ENSMUST00000209994 721 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm45704-201ENSMUST00000212582 403 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Cpsf1Q9EPU4 Gm14517-201ENSMUST00000119040 337 ntBASIC0.03□□□□□ -2.41
Cpsf1Q9EPU4 Gm11358-201ENSMUST00000122310 373 ntBASIC0.03□□□□□ -2.41
Cpsf1Q9EPU4 Gm25663-201ENSMUST00000157698 135 ntBASIC0.03□□□□□ -2.41
Cpsf1Q9EPU4 Gm22706-201ENSMUST00000157907 112 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms