Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm27893-201ENSMUST00000184408 194 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm44429-201ENSMUST00000203542 186 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm16171-201ENSMUST00000118004 324 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm22145-201ENSMUST00000157396 148 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm23559-201ENSMUST00000157824 103 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm23219-201ENSMUST00000158123 87 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm2962-201ENSMUST00000159266 336 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Mir6540-201ENSMUST00000184886 108 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Mir3569-201ENSMUST00000185080 58 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm20058-201ENSMUST00000186939 284 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm28453-203ENSMUST00000187041 189 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm29014-201ENSMUST00000191422 326 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm22304-201ENSMUST00000082688 129 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Gm22169-201ENSMUST00000083229 107 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Mir28a-201ENSMUST00000083560 86 ntBASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upf1Q9EPU0 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm5937-201ENSMUST00000119715 643 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm12721-201ENSMUST00000120621 268 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm24392-201ENSMUST00000158136 103 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm24667-201ENSMUST00000158938 103 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm10075-201ENSMUST00000162030 545 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm24811-201ENSMUST00000175313 100 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm37290-201ENSMUST00000195775 339 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.8□□□□□ -1.8
Upf1Q9EPU0 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm23462-201ENSMUST00000083264 104 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Gm25581-201ENSMUST00000083410 164 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Mir410-201ENSMUST00000083563 81 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.8□□□□□ -1.8
Upf1Q9EPU0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm24121-201ENSMUST00000102029 106 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm23951-201ENSMUST00000104029 132 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm22784-201ENSMUST00000104088 132 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm24907-201ENSMUST00000116932 128 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm24716-201ENSMUST00000157524 104 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm25664-201ENSMUST00000157697 107 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm24601-201ENSMUST00000157970 143 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm25866-201ENSMUST00000158245 112 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm24878-201ENSMUST00000158782 104 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Mir3076-201ENSMUST00000175415 60 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm26061-201ENSMUST00000175584 108 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm27379-201ENSMUST00000183730 123 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm5329-201ENSMUST00000186898 463 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm28155-201ENSMUST00000191066 151 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Mir7682-201ENSMUST00000198467 58 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm45013-201ENSMUST00000206883 178 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm44533-201ENSMUST00000207782 268 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Upf1Q9EPU0 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm24582-201ENSMUST00000103967 103 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Mir466h-201ENSMUST00000104748 81 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm14803-201ENSMUST00000117163 361 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm25454-201ENSMUST00000157947 315 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm22527-201ENSMUST00000158816 106 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm23476-201ENSMUST00000158881 274 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm23152-201ENSMUST00000175322 116 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm25024-201ENSMUST00000179667 104 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Upf1Q9EPU0 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm7065-201ENSMUST00000222150 474 ntBASIC3.78□□□□□ -1.8
Upf1Q9EPU0 Gm10025-201ENSMUST00000079568 372 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms