Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm25495-201ENSMUST00000104431 131 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm12309-201ENSMUST00000119889 182 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm5396-201ENSMUST00000121222 532 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm7925-201ENSMUST00000166690 401 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm23267-201ENSMUST00000178490 132 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm29397-201ENSMUST00000185205 333 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Mir1291-201ENSMUST00000199842 117 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
Chmp2aQ9DB34 Mir653-201ENSMUST00000102402 85 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm12053-201ENSMUST00000119022 252 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm11606-201ENSMUST00000120706 617 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm24598-201ENSMUST00000122510 74 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm23170-201ENSMUST00000157158 106 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm20438-201ENSMUST00000174441 329 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm23967-201ENSMUST00000175062 78 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm28794-201ENSMUST00000185276 136 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm28438-201ENSMUST00000188299 345 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm44990-201ENSMUST00000203922 217 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm25589-201ENSMUST00000082502 166 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Mir221-201ENSMUST00000083488 95 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.35□□□□□ -2.19
Chmp2aQ9DB34 Gm25068-201ENSMUST00000103895 110 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Gm15861-201ENSMUST00000120979 339 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Gm23858-201ENSMUST00000158384 106 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Mir6388-201ENSMUST00000184417 75 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Gm43810-201ENSMUST00000201018 232 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Gm29817-201ENSMUST00000210098 172 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Gm22229-201ENSMUST00000082987 108 ntBASIC1.34□□□□□ -2.19
Chmp2aQ9DB34 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm23907-201ENSMUST00000104595 189 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm13804-201ENSMUST00000119552 172 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm22817-201ENSMUST00000157448 356 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm25162-201ENSMUST00000158906 159 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Zfp950-206ENSMUST00000178819 171 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm38333-201ENSMUST00000193608 604 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm44011-201ENSMUST00000203336 394 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm43914-201ENSMUST00000203592 594 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm44336-201ENSMUST00000203696 468 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm45116-201ENSMUST00000207392 275 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Gm23453-201ENSMUST00000083326 106 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Chmp2aQ9DB34 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm24889-201ENSMUST00000104388 132 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Mir190b-201ENSMUST00000104803 80 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm12102-201ENSMUST00000118251 604 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm23589-201ENSMUST00000157660 105 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm24851-201ENSMUST00000158028 103 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm23144-201ENSMUST00000180226 107 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm18546-201ENSMUST00000197245 676 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Snora3-201ENSMUST00000083082 132 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Mir211-201ENSMUST00000083651 106 ntBASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Chmp2aQ9DB34 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm21754-201ENSMUST00000177550 479 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm23269-201ENSMUST00000178701 107 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm24518-201ENSMUST00000180275 94 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm28917-201ENSMUST00000187294 237 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm21064-202ENSMUST00000190583 278 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm28766-201ENSMUST00000191086 234 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm44654-201ENSMUST00000208052 329 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm26228-201ENSMUST00000082512 107 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm25080-201ENSMUST00000082526 107 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm25475-201ENSMUST00000082825 180 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm25404-201ENSMUST00000082970 107 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm25518-201ENSMUST00000083864 107 ntBASIC1.31□□□□□ -2.2
Chmp2aQ9DB34 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms