Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm43914-201ENSMUST00000203592 594 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm33654-201ENSMUST00000221704 215 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm21937-201ENSMUST00000222825 218 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm22062-201ENSMUST00000082563 107 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm23242-201ENSMUST00000083055 107 ntBASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Vps28Q9D1C8 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm24892-201ENSMUST00000122747 104 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm25888-201ENSMUST00000157778 302 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm24053-201ENSMUST00000158620 105 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm25486-201ENSMUST00000158726 63 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm23963-201ENSMUST00000179603 77 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm27845-201ENSMUST00000184479 114 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm29107-201ENSMUST00000190910 347 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm22866-201ENSMUST00000083947 177 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.44□□□□□ -2.02
Vps28Q9D1C8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm22073-201ENSMUST00000122668 189 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm22435-201ENSMUST00000158552 128 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Mir1927-201ENSMUST00000158579 109 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm38050-201ENSMUST00000191904 238 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm43722-201ENSMUST00000196054 124 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm8031-201ENSMUST00000213430 626 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Snord7-201ENSMUST00000083781 97 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm22154-201ENSMUST00000083844 131 ntBASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Vps28Q9D1C8 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm26015-201ENSMUST00000104402 125 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm25863-201ENSMUST00000158249 329 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm24005-201ENSMUST00000158459 296 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm38109-201ENSMUST00000195386 181 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm30155-201ENSMUST00000223458 339 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm22365-201ENSMUST00000093750 117 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.42□□□□□ -2.02
Vps28Q9D1C8 Gm25529-201ENSMUST00000104850 92 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm22316-201ENSMUST00000158012 216 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm15900-201ENSMUST00000161584 342 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm25996-201ENSMUST00000175393 117 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm25933-201ENSMUST00000178943 108 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm10105-201ENSMUST00000184601 270 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm28951-201ENSMUST00000190742 313 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm32033-201ENSMUST00000193483 339 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm5023-201ENSMUST00000217442 587 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Vps28Q9D1C8 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm25628-201ENSMUST00000084002 105 ntBASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Vps28Q9D1C8 Gm42606-201ENSMUST00000114209 239 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm15365-201ENSMUST00000122392 300 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm24210-201ENSMUST00000158263 133 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Mir6399-201ENSMUST00000184050 84 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm44794-201ENSMUST00000206550 411 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm34783-201ENSMUST00000209159 303 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.4□□□□□ -2.03
Vps28Q9D1C8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms