Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm15010-201ENSMUST00000117153 407 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm13378-201ENSMUST00000117483 336 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm25781-201ENSMUST00000122527 84 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm23120-201ENSMUST00000157654 287 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm6788-201ENSMUST00000166459 270 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Mir6951-201ENSMUST00000183910 75 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm44811-201ENSMUST00000209120 228 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm23041-201ENSMUST00000083868 106 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm23040-201ENSMUST00000083869 163 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.32□□□□□ -2.04
Ddx28Q9CWT6 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Mir759-201ENSMUST00000103254 98 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm14296-202ENSMUST00000108931 750 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm12793-201ENSMUST00000119268 292 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm13518-201ENSMUST00000120018 233 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm14770-201ENSMUST00000122197 312 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm25269-201ENSMUST00000122601 104 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm26105-201ENSMUST00000157253 190 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm16038-201ENSMUST00000159317 193 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm37162-201ENSMUST00000191708 551 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm45673-201ENSMUST00000210293 358 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.31□□□□□ -2.04
Ddx28Q9CWT6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm26247-201ENSMUST00000116702 91 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm13672-201ENSMUST00000117554 459 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm17100-201ENSMUST00000168963 272 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm22263-201ENSMUST00000180060 104 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm23190-201ENSMUST00000180307 64 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm32033-201ENSMUST00000193483 339 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Gm45879-201ENSMUST00000212521 392 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.3□□□□□ -2.04
Ddx28Q9CWT6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm24068-201ENSMUST00000104513 132 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm12304-201ENSMUST00000120312 385 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm23867-201ENSMUST00000122649 274 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm22843-201ENSMUST00000157710 134 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm22113-201ENSMUST00000158343 104 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm25284-201ENSMUST00000180345 141 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm28016-201ENSMUST00000184594 196 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm28418-201ENSMUST00000186179 423 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm28717-201ENSMUST00000189950 315 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm43264-201ENSMUST00000202284 325 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm25651-201ENSMUST00000083782 119 ntBASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.29□□□□□ -2.04
Ddx28Q9CWT6 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Mir1195-201ENSMUST00000116818 98 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm13439-201ENSMUST00000117541 409 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm14307-201ENSMUST00000118930 291 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm14297-201ENSMUST00000129110 291 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm23600-201ENSMUST00000157260 71 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm26400-201ENSMUST00000175012 85 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm25020-201ENSMUST00000178071 107 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Mir6355-201ENSMUST00000183687 106 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm37404-201ENSMUST00000195726 359 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm44337-201ENSMUST00000196553 114 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Mir3069-201ENSMUST00000198802 65 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Mir7217-201ENSMUST00000200304 62 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm44024-201ENSMUST00000203008 476 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms