Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm42570-201ENSMUST00000195937 292 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Gm42960-201ENSMUST00000202160 241 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
RTRAFQ9CQE8 Gm25414-201ENSMUST00000101814 107 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Mir223-201ENSMUST00000102112 110 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm22771-201ENSMUST00000104449 91 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm14823-201ENSMUST00000117698 238 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm14624-201ENSMUST00000117746 192 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm14674-201ENSMUST00000117816 342 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm25269-201ENSMUST00000122601 104 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm23523-201ENSMUST00000180190 107 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm27660-201ENSMUST00000184028 208 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Mir6916-201ENSMUST00000184514 63 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm27385-201ENSMUST00000184747 104 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm27624-201ENSMUST00000185047 177 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm28740-201ENSMUST00000186142 215 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm18185-201ENSMUST00000186725 667 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm28151-201ENSMUST00000189404 951 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Gm22997-201ENSMUST00000082845 107 ntBASIC1.28□□□□□ -2.2
RTRAFQ9CQE8 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm24982-201ENSMUST00000104456 132 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm11358-201ENSMUST00000122310 373 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm23983-201ENSMUST00000157142 114 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm25115-201ENSMUST00000157187 140 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm25059-201ENSMUST00000157367 117 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm24780-201ENSMUST00000157635 143 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm22731-201ENSMUST00000158086 94 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm9830-201ENSMUST00000178509 357 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm11392-201ENSMUST00000181419 710 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Mir7683-201ENSMUST00000183842 61 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm28383-201ENSMUST00000187563 139 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm29262-201ENSMUST00000190084 196 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm28648-201ENSMUST00000190092 343 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm23462-201ENSMUST00000083264 104 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm26175-201ENSMUST00000083794 131 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.27□□□□□ -2.21
RTRAFQ9CQE8 Gm26077-201ENSMUST00000104064 123 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm16242-201ENSMUST00000117741 334 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Trav20-201ENSMUST00000142754 347 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm24419-201ENSMUST00000157875 332 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm24191-201ENSMUST00000157977 122 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm27510-201ENSMUST00000158214 64 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm22891-201ENSMUST00000158641 164 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm24348-201ENSMUST00000158710 130 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Mir3086-201ENSMUST00000175072 87 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Mir28b-201ENSMUST00000175399 80 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Snord87-201ENSMUST00000175437 87 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm25730-201ENSMUST00000178753 165 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm37377-201ENSMUST00000191733 304 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm43739-201ENSMUST00000198294 307 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.26□□□□□ -2.21
RTRAFQ9CQE8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm24079-201ENSMUST00000104352 132 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm25529-201ENSMUST00000104850 92 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm15526-201ENSMUST00000112504 204 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm15010-201ENSMUST00000117153 407 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm5396-201ENSMUST00000121222 532 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm14678-201ENSMUST00000121396 482 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm26278-201ENSMUST00000157098 132 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm17113-201ENSMUST00000170118 171 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm21815-201ENSMUST00000178213 664 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm20874-201ENSMUST00000178356 663 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms