Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.27□□□□□ -2.37
Cspg4Q8VHY0 Gm25847-201ENSMUST00000116793 96 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm22338-201ENSMUST00000157715 129 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm27878-201ENSMUST00000184000 106 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm24282-201ENSMUST00000104232 66 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm23473-201ENSMUST00000158883 116 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm29011-201ENSMUST00000191059 712 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm37098-201ENSMUST00000192290 244 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm44404-201ENSMUST00000203979 636 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.26□□□□□ -2.37
Cspg4Q8VHY0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm13992-201ENSMUST00000120558 156 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm23116-201ENSMUST00000158481 67 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm44128-201ENSMUST00000204909 219 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm24535-201ENSMUST00000083140 107 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm23656-201ENSMUST00000122626 112 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm24808-201ENSMUST00000157993 118 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm18357-201ENSMUST00000188184 580 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.25□□□□□ -2.37
Cspg4Q8VHY0 Gm13885-201ENSMUST00000117569 187 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm24296-201ENSMUST00000158297 106 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm25026-201ENSMUST00000175017 188 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Mir6370-201ENSMUST00000183510 120 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm19891-201ENSMUST00000189771 303 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm10092-201ENSMUST00000077110 180 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm16373-201ENSMUST00000129517 303 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm27420-201ENSMUST00000183823 79 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm45658-201ENSMUST00000209197 580 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm22997-201ENSMUST00000082845 107 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm24948-201ENSMUST00000082866 207 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm24928-201ENSMUST00000083399 107 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm23102-201ENSMUST00000083724 116 ntBASIC0.24□□□□□ -2.37
Cspg4Q8VHY0 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm12889-201ENSMUST00000118684 241 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm12053-201ENSMUST00000119022 252 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm14517-201ENSMUST00000119040 337 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm25637-201ENSMUST00000157529 107 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm17052-201ENSMUST00000165496 289 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm43345-201ENSMUST00000199484 269 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Gm23299-201ENSMUST00000082708 79 ntBASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC0.23□□□□□ -2.37
Cspg4Q8VHY0 Mir670-201ENSMUST00000102380 100 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm23203-201ENSMUST00000104374 107 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm23792-201ENSMUST00000122557 93 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm19441-201ENSMUST00000221545 330 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm23836-201ENSMUST00000104434 129 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm23277-201ENSMUST00000157914 136 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm22611-201ENSMUST00000158288 150 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm22164-201ENSMUST00000158413 106 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm23419-201ENSMUST00000175523 84 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Mir7675-201ENSMUST00000184262 58 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm44336-201ENSMUST00000203696 468 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 Gm34783-201ENSMUST00000209159 303 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC0.22□□□□□ -2.37
Cspg4Q8VHY0 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms