Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm25961-201ENSMUST00000157174 135 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm25059-201ENSMUST00000157367 117 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm23123-201ENSMUST00000157648 144 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm24727-201ENSMUST00000158231 144 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm38311-201ENSMUST00000192945 165 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm34139-201ENSMUST00000196166 294 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.8□□□□□ -1.8
Rpa1Q8VEE4 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm23535-201ENSMUST00000157542 106 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm22553-201ENSMUST00000157797 295 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm23277-201ENSMUST00000157914 136 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm26291-201ENSMUST00000158889 137 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm7241-201ENSMUST00000159853 357 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm22800-201ENSMUST00000175627 94 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm25020-201ENSMUST00000178071 107 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm44476-201ENSMUST00000196225 91 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm44459-201ENSMUST00000203926 160 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm18462-201ENSMUST00000208112 417 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm23443-201ENSMUST00000082916 128 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Gm22297-201ENSMUST00000083312 106 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Mir370-201ENSMUST00000083499 79 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Mir34b-201ENSMUST00000083558 84 ntBASIC3.79□□□□□ -1.8
Rpa1Q8VEE4 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm23948-201ENSMUST00000104030 132 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm12190-201ENSMUST00000120001 187 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm16533-201ENSMUST00000140035 228 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm22075-201ENSMUST00000158599 192 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm17161-201ENSMUST00000169187 524 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm23152-201ENSMUST00000175322 116 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm27611-201ENSMUST00000184690 108 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm43676-201ENSMUST00000197532 540 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm43239-201ENSMUST00000200131 201 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm6030-201ENSMUST00000078768 402 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm25204-201ENSMUST00000082843 106 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm23239-201ENSMUST00000083006 181 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Gm25480-201ENSMUST00000083217 133 ntBASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rpa1Q8VEE4 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm24605-201ENSMUST00000104772 96 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm24480-201ENSMUST00000157442 103 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm26482-201ENSMUST00000158015 62 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm22395-201ENSMUST00000177427 96 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm6003-201ENSMUST00000187903 463 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm10242-201ENSMUST00000090064 330 ntBASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Rpa1Q8VEE4 Gm24855-201ENSMUST00000104848 97 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm11645-201ENSMUST00000121589 649 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm22726-201ENSMUST00000158089 179 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm25605-201ENSMUST00000158364 124 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm6625-201ENSMUST00000177870 272 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Rpa1Q8VEE4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.75□□□□□ -1.81
Rpa1Q8VEE4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms