Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm19441-201ENSMUST00000221545 330 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25404-201ENSMUST00000082970 107 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24490-201ENSMUST00000083803 98 ntBASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25832-201ENSMUST00000104140 130 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm15443-201ENSMUST00000118947 820 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm14551-201ENSMUST00000120802 256 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm15077-201ENSMUST00000122344 362 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23184-201ENSMUST00000122594 131 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22668-201ENSMUST00000158716 260 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24885-201ENSMUST00000158783 270 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Gm44135-201ENSMUST00000205221 368 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm15861-201ENSMUST00000120979 339 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22818-201ENSMUST00000157446 104 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22817-201ENSMUST00000157448 356 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23586-201ENSMUST00000157657 123 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Mir7225-201ENSMUST00000184178 54 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Mir6388-201ENSMUST00000184417 75 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm2628-201ENSMUST00000218019 426 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Gm22229-201ENSMUST00000082987 108 ntBASIC1.09□□□□□ -2.23
Ccdc28aQ8CEI3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.09□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23951-201ENSMUST00000104029 132 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm12102-201ENSMUST00000118251 604 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm13059-201ENSMUST00000119881 398 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22556-201ENSMUST00000157803 100 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm9593-201ENSMUST00000166034 469 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24388-201ENSMUST00000177872 107 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23145-201ENSMUST00000178912 79 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23862-201ENSMUST00000180342 94 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm37361-201ENSMUST00000194345 132 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm43004-201ENSMUST00000201872 703 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm18617-201ENSMUST00000222311 259 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Mir221-201ENSMUST00000083488 95 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Mir10a-201ENSMUST00000083585 110 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Mir452-201ENSMUST00000093629 85 ntBASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22831-201ENSMUST00000102473 109 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm25485-201ENSMUST00000104120 132 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23641-201ENSMUST00000157857 101 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24518-201ENSMUST00000180275 94 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm28437-201ENSMUST00000190277 783 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm19123-201ENSMUST00000190716 651 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm38333-201ENSMUST00000193608 604 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm42509-201ENSMUST00000197390 781 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm44449-201ENSMUST00000203610 153 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm26228-201ENSMUST00000082512 107 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm25080-201ENSMUST00000082526 107 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Mir22-201ENSMUST00000083595 95 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm25518-201ENSMUST00000083864 107 ntBASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc28aQ8CEI3 Gm8858-201ENSMUST00000118259 342 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm14793-201ENSMUST00000118739 311 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm12053-201ENSMUST00000119022 252 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm14402-201ENSMUST00000122217 508 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23981-201ENSMUST00000157136 106 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23829-201ENSMUST00000157392 270 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24777-201ENSMUST00000157644 107 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22664-201ENSMUST00000158719 105 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm3111-201ENSMUST00000167426 490 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms