Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm22264-201ENSMUST00000178200 107 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm7654-201ENSMUST00000186738 683 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm43431-201ENSMUST00000198577 340 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.55□□□□□ -2
Nup88Q8CEC0 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.54□□□□□ -2
Nup88Q8CEC0 Mdga2-203ENSMUST00000113942 423 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm23048-201ENSMUST00000157237 129 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Mir6355-201ENSMUST00000183687 106 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.54□□□□□ -2
Nup88Q8CEC0 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm44881-201ENSMUST00000205425 367 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm45375-201ENSMUST00000210338 280 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Snora69-201ENSMUST00000083708 131 ntBASIC2.54□□□□□ -2
Nup88Q8CEC0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm23548-201ENSMUST00000158963 106 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm22192-201ENSMUST00000175128 85 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm21978-201ENSMUST00000179696 377 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm26180-201ENSMUST00000179942 107 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm44149-201ENSMUST00000204256 226 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.53□□□□□ -2
Nup88Q8CEC0 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Nup88Q8CEC0 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm25632-201ENSMUST00000083112 85 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm26066-201ENSMUST00000083385 109 ntBASIC2.53□□□□□ -2
Nup88Q8CEC0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm12646-201ENSMUST00000119144 238 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm12304-201ENSMUST00000120312 385 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm27926-201ENSMUST00000157180 66 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm24010-201ENSMUST00000157731 282 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm22654-201ENSMUST00000157874 105 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm7258-201ENSMUST00000179317 300 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Mir6406-201ENSMUST00000183592 120 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm43624-201ENSMUST00000197368 180 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm43512-201ENSMUST00000198495 176 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm25801-201ENSMUST00000082638 106 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm24043-201ENSMUST00000083108 116 ntBASIC2.52□□□□□ -2.01
Nup88Q8CEC0 Gm23011-201ENSMUST00000104148 132 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm8292-201ENSMUST00000162574 396 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm28627-201ENSMUST00000186141 453 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm38050-201ENSMUST00000191904 238 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm37128-201ENSMUST00000192599 232 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm23242-201ENSMUST00000083055 107 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Snord104-201ENSMUST00000083192 70 ntBASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Nup88Q8CEC0 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm26077-201ENSMUST00000104064 123 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm24338-201ENSMUST00000104205 127 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm14402-201ENSMUST00000122217 508 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm25961-201ENSMUST00000157174 135 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm25486-201ENSMUST00000158726 63 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm22093-201ENSMUST00000158980 111 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm24388-201ENSMUST00000177872 107 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm21737-201ENSMUST00000178112 664 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm21815-201ENSMUST00000178213 664 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm20901-201ENSMUST00000180177 664 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm28090-201ENSMUST00000189458 664 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm21647-201ENSMUST00000189755 664 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Trbv6-201ENSMUST00000193743 276 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Trbv18-201ENSMUST00000194256 294 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm38109-201ENSMUST00000195386 181 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm44083-201ENSMUST00000203114 337 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm44555-201ENSMUST00000209008 148 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Nup88Q8CEC0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm26457-201ENSMUST00000082678 78 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms