Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm23548-201ENSMUST00000158963 106 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm24810-201ENSMUST00000175317 70 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm24304-201ENSMUST00000177635 107 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm26457-201ENSMUST00000082678 78 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.08□□□□□ -2.08
Nup54Q8BTS4 Gm24172-201ENSMUST00000104127 117 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Snord98-201ENSMUST00000116819 65 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm7164-201ENSMUST00000117503 450 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm14269-201ENSMUST00000120455 306 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm14287-201ENSMUST00000121060 117 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm14775-201ENSMUST00000122089 310 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm16328-201ENSMUST00000126985 196 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm22727-201ENSMUST00000158090 116 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm43739-201ENSMUST00000198294 307 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm18453-201ENSMUST00000208000 626 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm45730-201ENSMUST00000212560 395 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
Nup54Q8BTS4 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Mir701-201ENSMUST00000102208 109 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Nup54Q8BTS4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm22654-201ENSMUST00000157874 105 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Mir5101-201ENSMUST00000175181 83 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm22264-201ENSMUST00000178200 107 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm9892-201ENSMUST00000182415 992 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm28627-201ENSMUST00000186141 453 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm37128-201ENSMUST00000192599 232 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm37054-201ENSMUST00000193481 543 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm45315-201ENSMUST00000209283 333 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm23246-201ENSMUST00000083371 67 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm26066-201ENSMUST00000083385 109 ntBASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Nup54Q8BTS4 Gm24338-201ENSMUST00000104205 127 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm12304-201ENSMUST00000120312 385 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm25392-201ENSMUST00000157335 297 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm25488-201ENSMUST00000158728 118 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm16584-201ENSMUST00000159267 189 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm37923-201ENSMUST00000191624 161 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Gm24623-201ENSMUST00000082616 194 ntBASIC2.05□□□□□ -2.08
Nup54Q8BTS4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.05□□□□□ -2.08
Nup54Q8BTS4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm26396-201ENSMUST00000104093 132 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Mir669d-201ENSMUST00000104644 121 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm14894-201ENSMUST00000117170 270 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Snord11-201ENSMUST00000158468 84 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm25020-201ENSMUST00000178071 107 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm23191-201ENSMUST00000179147 107 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm21978-201ENSMUST00000179696 377 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm25121-201ENSMUST00000179846 79 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Mir7226-201ENSMUST00000184953 60 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm18356-201ENSMUST00000185677 623 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm37449-201ENSMUST00000193016 270 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm36953-201ENSMUST00000195295 268 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm18658-201ENSMUST00000195558 270 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm7495-201ENSMUST00000215099 426 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Gm45815-201ENSMUST00000220241 146 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.04□□□□□ -2.08
Nup54Q8BTS4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms