Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm29553-201ENSMUST00000189692 279 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm45119-201ENSMUST00000207612 199 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm44811-201ENSMUST00000209120 228 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm24313-201ENSMUST00000082561 133 ntBASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Tdp1Q8BJ37 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm24098-201ENSMUST00000102075 109 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm25381-201ENSMUST00000102078 109 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm26255-201ENSMUST00000122492 103 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm25325-201ENSMUST00000122559 86 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm23867-201ENSMUST00000122649 274 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm23557-201ENSMUST00000157820 138 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm23641-201ENSMUST00000157857 101 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm22085-201ENSMUST00000158344 110 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Mir669n-201ENSMUST00000158636 54 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm16326-201ENSMUST00000162843 414 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm5967-201ENSMUST00000172723 494 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm23793-201ENSMUST00000179396 117 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm27443-201ENSMUST00000184660 98 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm6060-201ENSMUST00000188671 251 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm45403-201ENSMUST00000209453 276 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm5023-201ENSMUST00000217442 587 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.34□□□□□ -2.03
Tdp1Q8BJ37 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Tdp1Q8BJ37 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
Tdp1Q8BJ37 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Mir758-201ENSMUST00000103260 81 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm23109-201ENSMUST00000116867 126 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm27926-201ENSMUST00000157180 66 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm23586-201ENSMUST00000157657 123 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm24900-201ENSMUST00000158128 134 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm22435-201ENSMUST00000158552 128 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm25162-201ENSMUST00000158906 159 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm6801-201ENSMUST00000190697 339 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm37361-201ENSMUST00000194345 132 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm44524-201ENSMUST00000203899 271 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Snord42a-201ENSMUST00000082606 65 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Tdp1Q8BJ37 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm25054-201ENSMUST00000157370 97 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm24716-201ENSMUST00000157524 104 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm26345-201ENSMUST00000157534 120 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm25671-201ENSMUST00000178612 105 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm6660-201ENSMUST00000179149 468 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm23307-201ENSMUST00000179167 105 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm25286-201ENSMUST00000179790 105 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Mir6370-201ENSMUST00000183510 120 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm28717-201ENSMUST00000189950 315 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm45315-201ENSMUST00000209283 333 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Snord68-201ENSMUST00000082516 86 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm24623-201ENSMUST00000082616 194 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.32□□□□□ -2.04
Tdp1Q8BJ37 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm22021-201ENSMUST00000104353 107 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm15846-201ENSMUST00000116022 320 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm11798-201ENSMUST00000119150 421 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm14980-201ENSMUST00000121247 736 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm12155-201ENSMUST00000121267 160 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm24481-201ENSMUST00000157210 102 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Mir6905-201ENSMUST00000184228 70 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Mir6901-201ENSMUST00000185062 62 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm37579-201ENSMUST00000194291 142 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm37404-201ENSMUST00000195726 359 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm43722-201ENSMUST00000196054 124 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm33654-201ENSMUST00000221704 215 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.31□□□□□ -2.04
Tdp1Q8BJ37 Gm21937-201ENSMUST00000222825 218 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms