Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 n-R5s216-201ENSMUST00000122755 112 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Snord11-201ENSMUST00000158468 84 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm23473-201ENSMUST00000158883 116 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm3025-201ENSMUST00000163454 489 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm3111-201ENSMUST00000167426 490 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Mir5129-201ENSMUST00000174938 78 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm38208-201ENSMUST00000192476 114 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm44564-201ENSMUST00000207985 180 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm8940-201ENSMUST00000212585 219 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm26206-201ENSMUST00000082908 110 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Mir362-201ENSMUST00000093592 65 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Mir544-201ENSMUST00000103813 78 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm16431-201ENSMUST00000117454 431 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm12392-201ENSMUST00000118014 938 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm14360-201ENSMUST00000120670 393 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm25332-201ENSMUST00000158038 105 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm44459-201ENSMUST00000203926 160 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Snord96a-201ENSMUST00000082791 81 ntBASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Ttc28Q80XJ3 Gm13672-201ENSMUST00000117554 459 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm7350-201ENSMUST00000120964 636 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm22226-201ENSMUST00000157355 109 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm24846-201ENSMUST00000158033 108 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm26213-201ENSMUST00000158582 110 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm25020-201ENSMUST00000178071 107 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 AC154257.2-201ENSMUST00000224166 340 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm25739-201ENSMUST00000082886 107 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Mir214-201ENSMUST00000083582 110 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm23792-201ENSMUST00000122557 93 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm16354-201ENSMUST00000155376 150 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm25423-201ENSMUST00000157609 107 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm7953-201ENSMUST00000168278 469 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Trbv24-201ENSMUST00000194614 347 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm44326-201ENSMUST00000198226 101 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Gm19855-201ENSMUST00000210145 249 ntBASIC0.28□□□□□ -2.36
Ttc28Q80XJ3 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.28□□□□□ -2.37
Ttc28Q80XJ3 Gm24588-201ENSMUST00000116696 83 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm25060-201ENSMUST00000157374 130 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm26349-201ENSMUST00000157530 130 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm37193-201ENSMUST00000193087 513 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm45387-201ENSMUST00000209792 632 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 AC156574.2-201ENSMUST00000228023 282 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm23429-201ENSMUST00000122486 149 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm25637-201ENSMUST00000157529 107 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm22611-201ENSMUST00000158288 150 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm28843-201ENSMUST00000189198 678 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm29546-201ENSMUST00000191171 678 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Snora41-201ENSMUST00000082668 132 ntBASIC0.27□□□□□ -2.37
Ttc28Q80XJ3 Gm25097-201ENSMUST00000104042 145 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm15176-201ENSMUST00000117734 135 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm13454-201ENSMUST00000118166 483 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm25335-201ENSMUST00000158043 103 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm17154-201ENSMUST00000165748 431 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Mir8106-201ENSMUST00000184520 139 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Mir6964-201ENSMUST00000200252 59 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm17991-201ENSMUST00000208139 297 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Gm45658-201ENSMUST00000209197 580 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.26□□□□□ -2.37
Ttc28Q80XJ3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms