Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.2□□□□□ -2.22
Rpap1Q80TE0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.2□□□□□ -2.22
Rpap1Q80TE0 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.2□□□□□ -2.22
Rpap1Q80TE0 Gm26437-201ENSMUST00000082595 105 ntBASIC1.2□□□□□ -2.22
Rpap1Q80TE0 Gm23516-201ENSMUST00000093728 107 ntBASIC1.2□□□□□ -2.22
Rpap1Q80TE0 Gm14989-201ENSMUST00000120497 207 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm23381-201ENSMUST00000157676 94 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm29231-201ENSMUST00000179850 319 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm43250-201ENSMUST00000196536 273 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm18691-201ENSMUST00000203593 872 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Mir29c-201ENSMUST00000083614 88 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Gm10360-201ENSMUST00000097219 272 ntBASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Rpap1Q80TE0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm22689-201ENSMUST00000102452 110 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm15175-201ENSMUST00000117629 132 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm24467-201ENSMUST00000157887 126 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm8114-201ENSMUST00000172225 484 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm25243-201ENSMUST00000174912 207 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm24713-201ENSMUST00000178850 107 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm25448-201ENSMUST00000180065 107 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Rpap1Q80TE0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.18□□□□□ -2.22
Rpap1Q80TE0 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm24340-201ENSMUST00000104208 97 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm23202-201ENSMUST00000104376 129 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm12393-201ENSMUST00000117084 848 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm25020-201ENSMUST00000178071 107 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm42807-201ENSMUST00000200141 329 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.17□□□□□ -2.22
Rpap1Q80TE0 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm6369-201ENSMUST00000069626 412 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Rpap1Q80TE0 Mir466n-201ENSMUST00000104798 94 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Gm16265-201ENSMUST00000134558 108 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Gm23605-201ENSMUST00000157255 127 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Gm23180-201ENSMUST00000158686 125 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Mir465-201ENSMUST00000093563 74 ntBASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Rpap1Q80TE0 Gm25088-201ENSMUST00000101803 79 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm6587-201ENSMUST00000120219 613 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm23429-201ENSMUST00000122486 149 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm27396-201ENSMUST00000157708 58 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm20630-201ENSMUST00000177387 551 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm38231-201ENSMUST00000192030 347 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm9236-201ENSMUST00000196892 587 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Mir3068-202ENSMUST00000197755 79 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm46103-201ENSMUST00000217614 341 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.15□□□□□ -2.22
Rpap1Q80TE0 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Ear14-201ENSMUST00000049559 468 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm25853-201ENSMUST00000082793 132 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm24258-201ENSMUST00000083739 133 ntBASIC1.15□□□□□ -2.22
Rpap1Q80TE0 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm14530-201ENSMUST00000122391 333 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm24594-201ENSMUST00000122502 99 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm23118-201ENSMUST00000122657 187 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm23078-201ENSMUST00000157848 148 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm23034-201ENSMUST00000158001 147 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm28283-201ENSMUST00000185509 178 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm28437-201ENSMUST00000190277 783 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm37997-201ENSMUST00000193515 267 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm26328-201ENSMUST00000082821 107 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Gm25794-201ENSMUST00000083286 107 ntBASIC1.15□□□□□ -2.23
Rpap1Q80TE0 Mir653-201ENSMUST00000102402 85 ntBASIC1.14□□□□□ -2.23
Rpap1Q80TE0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.14□□□□□ -2.23
Rpap1Q80TE0 Gm23819-201ENSMUST00000158744 109 ntBASIC1.14□□□□□ -2.23
Rpap1Q80TE0 Gm16546-201ENSMUST00000159442 355 ntBASIC1.14□□□□□ -2.23
Rpap1Q80TE0 Gm9830-201ENSMUST00000178509 357 ntBASIC1.14□□□□□ -2.23
Rpap1Q80TE0 Gm29216-201ENSMUST00000187117 492 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms