Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm17522-201ENSMUST00000178144 498 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm26265-202ENSMUST00000196326 133 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm9174-201ENSMUST00000078149 255 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm24625-201ENSMUST00000082622 130 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm25630-201ENSMUST00000084000 162 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pif1Q80SX8 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.31□□□□□ -1.88
Pif1Q80SX8 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Mir875-201ENSMUST00000104698 78 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm14973-201ENSMUST00000117248 255 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm14775-201ENSMUST00000122089 310 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm25933-201ENSMUST00000178943 108 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pif1Q80SX8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm43264-201ENSMUST00000202284 325 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm44084-201ENSMUST00000203947 409 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.3□□□□□ -1.88
Pif1Q80SX8 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm5899-201ENSMUST00000071770 270 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm23297-201ENSMUST00000083184 127 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Rny1-201ENSMUST00000083767 112 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Pif1Q80SX8 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.3□□□□□ -1.88
Pif1Q80SX8 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm22151-201ENSMUST00000116963 58 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm15002-201ENSMUST00000118406 452 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Mir28b-201ENSMUST00000175399 80 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm27540-201ENSMUST00000184950 187 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm19901-201ENSMUST00000192191 495 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm45365-201ENSMUST00000209489 256 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm19118-201ENSMUST00000222554 98 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Snora70-201ENSMUST00000083047 137 ntBASIC3.29□□□□□ -1.88
Pif1Q80SX8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pif1Q80SX8 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pif1Q80SX8 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pif1Q80SX8 Gm22195-201ENSMUST00000116861 108 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm24914-201ENSMUST00000157285 313 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm25888-201ENSMUST00000157778 302 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm24304-201ENSMUST00000177635 107 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm27249-201ENSMUST00000185049 328 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm37089-201ENSMUST00000195616 129 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.28□□□□□ -1.88
Pif1Q80SX8 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pif1Q80SX8 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm22571-201ENSMUST00000082984 70 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pif1Q80SX8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pif1Q80SX8 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pif1Q80SX8 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.28□□□□□ -1.88
Pif1Q80SX8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Pif1Q80SX8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm23532-201ENSMUST00000104569 112 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm13650-201ENSMUST00000117729 433 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm23852-201ENSMUST00000158376 77 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm2719-201ENSMUST00000191929 444 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm9795-201ENSMUST00000062156 693 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm24950-201ENSMUST00000082768 191 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm23971-201ENSMUST00000083317 191 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm23849-201ENSMUST00000083833 191 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm26316-201ENSMUST00000083886 191 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.27□□□□□ -1.89
Pif1Q80SX8 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.27□□□□□ -1.89
Pif1Q80SX8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm26249-201ENSMUST00000116708 118 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm24598-201ENSMUST00000122510 74 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms