Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23232-201ENSMUST00000157300 105 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm25392-201ENSMUST00000157335 297 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm24358-201ENSMUST00000158424 288 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm26928-201ENSMUST00000182674 572 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm37923-201ENSMUST00000191624 161 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm37713-201ENSMUST00000191746 198 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm10088-201ENSMUST00000074116 423 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Gm23727-201ENSMUST00000083352 164 ntBASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ddx55Q6ZPL9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm25500-201ENSMUST00000104426 123 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Mir466k-201ENSMUST00000116774 122 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm24909-201ENSMUST00000157290 280 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm23325-201ENSMUST00000157422 129 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm22447-201ENSMUST00000158155 92 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm5329-201ENSMUST00000186898 463 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm43704-201ENSMUST00000196164 496 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Rny1-201ENSMUST00000083767 112 ntBASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ddx55Q6ZPL9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm24890-201ENSMUST00000104389 102 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm23716-201ENSMUST00000157348 144 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm23559-201ENSMUST00000157824 103 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm27579-201ENSMUST00000158113 63 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm22664-201ENSMUST00000158719 105 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm6842-201ENSMUST00000211361 390 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm26327-201ENSMUST00000093724 111 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Ddx55Q6ZPL9 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm14792-201ENSMUST00000119725 258 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm15272-201ENSMUST00000120865 233 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm23331-201ENSMUST00000157423 108 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm23355-201ENSMUST00000177614 107 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm23148-201ENSMUST00000180367 107 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm43680-201ENSMUST00000199466 340 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm45365-201ENSMUST00000209489 256 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm18015-201ENSMUST00000214879 316 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm25258-201ENSMUST00000083049 107 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm23453-201ENSMUST00000083326 106 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.28□□□□□ -1.88
Ddx55Q6ZPL9 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.28□□□□□ -1.89
Ddx55Q6ZPL9 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.28□□□□□ -1.89
Ddx55Q6ZPL9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Mir693-201ENSMUST00000102187 89 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Mir499-201ENSMUST00000102357 79 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm24282-201ENSMUST00000104232 66 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm24274-201ENSMUST00000116787 124 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm14894-201ENSMUST00000117170 270 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm15183-201ENSMUST00000118933 348 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm11572-201ENSMUST00000119164 120 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm13210-201ENSMUST00000121483 273 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm15065-201ENSMUST00000121699 273 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm4468-201ENSMUST00000170206 294 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm20718-201ENSMUST00000176058 259 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm37449-201ENSMUST00000193016 270 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm18658-201ENSMUST00000195558 270 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Mir3535-201ENSMUST00000197651 147 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm23723-201ENSMUST00000082996 132 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.27□□□□□ -1.89
Ddx55Q6ZPL9 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.26□□□□□ -1.89
Ddx55Q6ZPL9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.26□□□□□ -1.89
Ddx55Q6ZPL9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms