Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm15010-201ENSMUST00000117153 407 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm14670-201ENSMUST00000117327 337 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm11798-201ENSMUST00000119150 421 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm12304-201ENSMUST00000120312 385 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm13396-201ENSMUST00000120617 271 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm22037-201ENSMUST00000157280 296 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Mir8090-201ENSMUST00000185078 136 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm29229-201ENSMUST00000188874 323 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm45013-201ENSMUST00000206883 178 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.78□□□□□ -1.96
Smarca1Q6PGB8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm25848-201ENSMUST00000116790 144 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm25269-201ENSMUST00000122601 104 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Mir6353-201ENSMUST00000183596 113 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm27410-201ENSMUST00000183851 115 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm43505-201ENSMUST00000200579 139 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm25929-201ENSMUST00000082784 107 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Smarca1Q6PGB8 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm24670-201ENSMUST00000104154 132 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm15844-201ENSMUST00000118016 576 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm13339-201ENSMUST00000120651 510 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm6956-201ENSMUST00000134724 546 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm23223-201ENSMUST00000158119 127 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm22534-201ENSMUST00000158173 104 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm24304-201ENSMUST00000177635 107 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm9830-201ENSMUST00000178509 357 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm44337-201ENSMUST00000196553 114 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Snord42a-201ENSMUST00000082606 65 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm23462-201ENSMUST00000083264 104 ntBASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Smarca1Q6PGB8 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm22021-201ENSMUST00000104353 107 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm13880-201ENSMUST00000118421 474 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm7209-201ENSMUST00000122339 333 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm23980-201ENSMUST00000157135 158 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm22085-201ENSMUST00000158344 110 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm22858-201ENSMUST00000174972 76 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Mir3075-201ENSMUST00000175340 85 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm25020-201ENSMUST00000178071 107 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm27753-201ENSMUST00000184742 203 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm37162-201ENSMUST00000191708 551 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Mir378a-201ENSMUST00000198300 66 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm6796-201ENSMUST00000211919 243 ntBASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Smarca1Q6PGB8 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm14296-202ENSMUST00000108931 750 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm14215-201ENSMUST00000120578 221 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm16355-201ENSMUST00000128606 231 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm22227-201ENSMUST00000157356 259 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm23589-201ENSMUST00000157660 105 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm22483-201ENSMUST00000157986 274 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm25863-201ENSMUST00000158249 329 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm25956-201ENSMUST00000175115 217 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm24388-201ENSMUST00000177872 107 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm29397-201ENSMUST00000185205 333 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm8031-201ENSMUST00000213430 626 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm26265-201ENSMUST00000083277 135 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Gm23246-201ENSMUST00000083371 67 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Mir127-201ENSMUST00000093568 70 ntBASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Smarca1Q6PGB8 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm22032-201ENSMUST00000116946 116 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm13862-201ENSMUST00000121220 197 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm24504-201ENSMUST00000157679 100 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm22113-201ENSMUST00000158343 104 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Snord11-201ENSMUST00000158468 84 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm23024-201ENSMUST00000158770 292 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm16584-201ENSMUST00000159267 189 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm25457-201ENSMUST00000179509 107 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm18991-201ENSMUST00000209225 746 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms