Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Mir7016-201ENSMUST00000184308 72 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Gm18971-201ENSMUST00000197240 374 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Gm25578-201ENSMUST00000083406 104 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.27□□□□□ -2.05
Herc4Q6PAV2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm13153-201ENSMUST00000120969 637 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm23048-201ENSMUST00000157237 129 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm25454-201ENSMUST00000157947 315 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm24191-201ENSMUST00000157977 122 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm27510-201ENSMUST00000158214 64 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm22264-201ENSMUST00000178200 107 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm25314-201ENSMUST00000178810 79 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Mir3068-202ENSMUST00000197755 79 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm44024-201ENSMUST00000203008 476 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm10264-201ENSMUST00000220589 429 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.26□□□□□ -2.05
Herc4Q6PAV2 Gm42606-201ENSMUST00000114209 239 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm24590-201ENSMUST00000116699 119 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm25460-201ENSMUST00000157954 127 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm23016-201ENSMUST00000158431 62 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm21737-201ENSMUST00000178112 664 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm20874-201ENSMUST00000178356 663 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm20901-201ENSMUST00000180177 664 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Mir7093-201ENSMUST00000184195 101 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm28090-201ENSMUST00000189458 664 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm21647-201ENSMUST00000189755 664 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm38050-201ENSMUST00000191904 238 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm43680-201ENSMUST00000199466 340 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm44726-201ENSMUST00000203427 217 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm45402-201ENSMUST00000211796 223 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.25□□□□□ -2.05
Herc4Q6PAV2 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.25□□□□□ -2.05
Herc4Q6PAV2 Gm16242-201ENSMUST00000117741 334 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm13475-201ENSMUST00000119290 234 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm23641-201ENSMUST00000157857 101 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm17148-201ENSMUST00000164702 249 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm26430-201ENSMUST00000178054 107 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Mir6406-201ENSMUST00000183592 120 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Mir3569-201ENSMUST00000185080 58 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gm38041-201ENSMUST00000194445 661 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.24□□□□□ -2.05
Herc4Q6PAV2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.24□□□□□ -2.05
Herc4Q6PAV2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.24□□□□□ -2.05
Herc4Q6PAV2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm24098-201ENSMUST00000102075 109 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm25381-201ENSMUST00000102078 109 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm14774-201ENSMUST00000117857 536 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm23435-201ENSMUST00000157183 156 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm22037-201ENSMUST00000157280 296 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm22328-201ENSMUST00000158074 112 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm24577-201ENSMUST00000158580 63 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm26501-201ENSMUST00000178307 107 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm28627-201ENSMUST00000186141 453 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm28740-201ENSMUST00000186142 215 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm43739-201ENSMUST00000198294 307 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Gm44465-201ENSMUST00000199536 114 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.23□□□□□ -2.05
Herc4Q6PAV2 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.23□□□□□ -2.05
Herc4Q6PAV2 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms