Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Mir758-201ENSMUST00000103260 81 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm13475-201ENSMUST00000119290 234 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm15030-201ENSMUST00000119804 484 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm14588-201ENSMUST00000119895 172 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm23381-201ENSMUST00000157676 94 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm27510-201ENSMUST00000158214 64 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Snord11-201ENSMUST00000158468 84 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm17148-201ENSMUST00000164702 249 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm26501-201ENSMUST00000178307 107 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm27317-201ENSMUST00000183533 95 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Mir7225-201ENSMUST00000184178 54 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm28740-201ENSMUST00000186142 215 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm37557-201ENSMUST00000191640 139 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm37579-201ENSMUST00000194291 142 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm44465-201ENSMUST00000199536 114 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm20102-201ENSMUST00000222445 220 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Mir93-201ENSMUST00000083593 88 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.14□□□□□ -2.07
Rtl3Q6P1Y1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm23010-201ENSMUST00000104151 126 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm14670-201ENSMUST00000117327 337 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm14215-201ENSMUST00000120578 221 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm14402-201ENSMUST00000122217 508 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm14530-201ENSMUST00000122391 333 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm24419-201ENSMUST00000157875 332 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm22328-201ENSMUST00000158074 112 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Mir195b-201ENSMUST00000184814 97 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Trbv18-201ENSMUST00000194256 294 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm34073-201ENSMUST00000195736 212 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm24037-201ENSMUST00000082871 180 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm26265-201ENSMUST00000083277 135 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.13□□□□□ -2.07
Rtl3Q6P1Y1 Gm23324-201ENSMUST00000157421 131 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm22554-201ENSMUST00000157798 147 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Mir669n-201ENSMUST00000158636 54 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm21754-201ENSMUST00000177550 479 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm25457-201ENSMUST00000179509 107 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm18356-201ENSMUST00000185677 623 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm7214-201ENSMUST00000222428 272 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Snora69-201ENSMUST00000083708 131 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Rtl3Q6P1Y1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm24098-201ENSMUST00000102075 109 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm25381-201ENSMUST00000102078 109 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm12721-201ENSMUST00000120621 268 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Trav20-201ENSMUST00000142754 347 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm24053-201ENSMUST00000158620 105 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm25488-201ENSMUST00000158728 118 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm24084-201ENSMUST00000175173 137 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm43367-201ENSMUST00000199986 625 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm45730-201ENSMUST00000212560 395 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm25207-201ENSMUST00000093745 107 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Rtl3Q6P1Y1 Gm13457-201ENSMUST00000117885 267 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm25625-201ENSMUST00000157221 96 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm23331-201ENSMUST00000157423 108 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm24857-201ENSMUST00000158061 310 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm25012-201ENSMUST00000158396 164 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm25711-201ENSMUST00000158633 128 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm23342-201ENSMUST00000158958 115 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm37923-201ENSMUST00000191624 161 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm43739-201ENSMUST00000198294 307 ntBASIC2.1□□□□□ -2.07
Rtl3Q6P1Y1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms