Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Snord98-201ENSMUST00000116819 65 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm13457-201ENSMUST00000117885 267 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm24478-201ENSMUST00000157439 158 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm23589-201ENSMUST00000157660 105 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm22666-201ENSMUST00000158717 164 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm25956-201ENSMUST00000175115 217 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm24388-201ENSMUST00000177872 107 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm25457-201ENSMUST00000179509 107 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Mir7016-201ENSMUST00000184308 72 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Mir6376-201ENSMUST00000185149 131 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.51□□□□□ -2.01
Trim27Q62158 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm45730-201ENSMUST00000212560 395 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm22062-201ENSMUST00000082563 107 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim27Q62158 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.51□□□□□ -2.01
Trim27Q62158 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trim27Q62158 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm15010-201ENSMUST00000117153 407 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm25625-201ENSMUST00000157221 96 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm25711-201ENSMUST00000158633 128 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm25121-201ENSMUST00000179846 79 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim27Q62158 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim27Q62158 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim27Q62158 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm43367-201ENSMUST00000199986 625 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim27Q62158 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm24623-201ENSMUST00000082616 194 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm25896-201ENSMUST00000083713 136 ntBASIC2.5□□□□□ -2.01
Trim27Q62158 Gm7164-201ENSMUST00000117503 450 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim27Q62158 Gm26345-201ENSMUST00000157534 120 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Mir28b-201ENSMUST00000175399 80 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Mir6901-201ENSMUST00000185062 62 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim27Q62158 Gm43914-201ENSMUST00000203592 594 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Gm44881-201ENSMUST00000205425 367 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Gm44844-201ENSMUST00000207242 336 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trim27Q62158 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim27Q62158 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trim27Q62158 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.49□□□□□ -2.01
Trim27Q62158 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim27Q62158 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim27Q62158 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim27Q62158 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim27Q62158 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim27Q62158 Gm22678-201ENSMUST00000116974 101 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm14624-201ENSMUST00000117746 192 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm12941-201ENSMUST00000117934 220 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm15844-201ENSMUST00000118016 576 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim27Q62158 Gm5396-201ENSMUST00000121222 532 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm21754-201ENSMUST00000177550 479 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm25020-201ENSMUST00000178071 107 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm37054-201ENSMUST00000193481 543 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim27Q62158 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.48□□□□□ -2.01
Trim27Q62158 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim27Q62158 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Trim27Q62158 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm24282-201ENSMUST00000104232 66 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm14670-201ENSMUST00000117327 337 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm12697-201ENSMUST00000118008 667 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm14530-201ENSMUST00000122391 333 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm16328-201ENSMUST00000126985 196 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm24084-201ENSMUST00000175173 137 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm25996-201ENSMUST00000175393 117 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm23191-201ENSMUST00000179147 107 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm27317-201ENSMUST00000183533 95 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm29604-201ENSMUST00000187176 163 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm37377-201ENSMUST00000191733 304 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm45013-201ENSMUST00000206883 178 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm2829-201ENSMUST00000213121 499 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.47□□□□□ -2.01
Trim27Q62158 Gm22978-201ENSMUST00000082607 160 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm26457-201ENSMUST00000082678 78 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm23453-201ENSMUST00000083326 106 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm25207-201ENSMUST00000093745 107 ntBASIC2.47□□□□□ -2.01
Trim27Q62158 Gm24098-201ENSMUST00000102075 109 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms