Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Snora69-201ENSMUST00000083708 131 ntBASIC2.39□□□□□ -2.03
Ctr9Q62018 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ctr9Q62018 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ctr9Q62018 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm23950-201ENSMUST00000104026 129 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm15846-201ENSMUST00000116022 320 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm12513-201ENSMUST00000118617 352 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm6444-201ENSMUST00000119611 458 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm24857-201ENSMUST00000158061 310 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm25162-201ENSMUST00000158906 159 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm23342-201ENSMUST00000158958 115 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm26159-201ENSMUST00000158968 104 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm21737-201ENSMUST00000178112 664 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm21815-201ENSMUST00000178213 664 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm20874-201ENSMUST00000178356 663 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm20901-201ENSMUST00000180177 664 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm21647-201ENSMUST00000189755 664 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm34073-201ENSMUST00000195736 212 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ctr9Q62018 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm23242-201ENSMUST00000083055 107 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm24043-201ENSMUST00000083108 116 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm25578-201ENSMUST00000083406 104 ntBASIC2.38□□□□□ -2.03
Ctr9Q62018 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ctr9Q62018 Gm22151-201ENSMUST00000116963 58 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm16355-201ENSMUST00000128606 231 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm22328-201ENSMUST00000158074 112 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm23191-201ENSMUST00000179147 107 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm37361-201ENSMUST00000194345 132 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm43286-201ENSMUST00000197420 424 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm17990-201ENSMUST00000211728 553 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Ctr9Q62018 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.37□□□□□ -2.03
Ctr9Q62018 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.37□□□□□ -2.03
Ctr9Q62018 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm22270-201ENSMUST00000104034 132 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm22037-201ENSMUST00000157280 296 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.36□□□□□ -2.03
Ctr9Q62018 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm25135-201ENSMUST00000082648 143 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ctr9Q62018 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Ctr9Q62018 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm6954-201ENSMUST00000117416 225 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm13457-201ENSMUST00000117885 267 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm11935-201ENSMUST00000118608 399 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm15497-201ENSMUST00000119137 551 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm22080-201ENSMUST00000157591 106 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm23586-201ENSMUST00000157657 123 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm24601-201ENSMUST00000157970 143 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm27510-201ENSMUST00000158214 64 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm7925-201ENSMUST00000166690 401 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm28627-201ENSMUST00000186141 453 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm28825-201ENSMUST00000186233 238 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm37128-201ENSMUST00000192599 232 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm37054-201ENSMUST00000193481 543 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm18971-201ENSMUST00000197240 374 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm43193-201ENSMUST00000197732 441 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm43510-201ENSMUST00000197922 353 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.35□□□□□ -2.03
Ctr9Q62018 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.35□□□□□ -2.03
Ctr9Q62018 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ctr9Q62018 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.35□□□□□ -2.03
Ctr9Q62018 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ctr9Q62018 Snord98-201ENSMUST00000116819 65 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm14269-201ENSMUST00000120455 306 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Trav20-201ENSMUST00000142754 347 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm22791-201ENSMUST00000157232 145 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm24478-201ENSMUST00000157439 158 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm24783-201ENSMUST00000157639 100 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ctr9Q62018 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm10105-201ENSMUST00000184601 270 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Mir195b-201ENSMUST00000184814 97 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm18356-201ENSMUST00000185677 623 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm45150-201ENSMUST00000206051 467 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm25801-201ENSMUST00000082638 106 ntBASIC2.34□□□□□ -2.03
Ctr9Q62018 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ctr9Q62018 Gm24984-201ENSMUST00000104454 133 ntBASIC2.33□□□□□ -2.04
Ctr9Q62018 Gm12934-201ENSMUST00000119221 343 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms