Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm19257-201ENSMUST00000186121 183 ntBASIC2.6□□□□□ -1.99
ClpbQ60649 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.6□□□□□ -1.99
ClpbQ60649 Gm44010-201ENSMUST00000204432 331 ntBASIC2.6□□□□□ -1.99
ClpbQ60649 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.6□□□□□ -1.99
ClpbQ60649 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.6□□□□□ -1.99
ClpbQ60649 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.6□□□□□ -1.99
ClpbQ60649 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.6□□□□□ -1.99
ClpbQ60649 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ClpbQ60649 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
ClpbQ60649 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
ClpbQ60649 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
ClpbQ60649 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm11285-201ENSMUST00000118443 322 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm14602-201ENSMUST00000118625 340 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm12304-201ENSMUST00000120312 385 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm12617-201ENSMUST00000121268 381 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 DQ267100-201ENSMUST00000122600 72 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm24726-201ENSMUST00000158232 121 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm24681-201ENSMUST00000158760 107 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Mir3092-201ENSMUST00000174954 96 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Mir6386-201ENSMUST00000183558 104 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Mir7242-201ENSMUST00000183710 79 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm28848-201ENSMUST00000189984 168 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm43600-201ENSMUST00000202134 223 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm45207-201ENSMUST00000207469 145 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm9318-201ENSMUST00000222444 438 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm24460-201ENSMUST00000082731 106 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm26458-201ENSMUST00000082832 128 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm23731-201ENSMUST00000083749 107 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 Gm23851-201ENSMUST00000083831 103 ntBASIC2.59□□□□□ -1.99
ClpbQ60649 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.59□□□□□ -2
ClpbQ60649 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.59□□□□□ -2
ClpbQ60649 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
ClpbQ60649 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
ClpbQ60649 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ClpbQ60649 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ClpbQ60649 Gm23128-201ENSMUST00000104257 132 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm6954-201ENSMUST00000117416 225 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm13432-201ENSMUST00000118861 241 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm11606-201ENSMUST00000120706 617 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm14775-201ENSMUST00000122089 310 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm14770-201ENSMUST00000122197 312 ntBASIC2.58□□□□□ -2
ClpbQ60649 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 Gm25270-201ENSMUST00000122606 138 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.58□□□□□ -2
ClpbQ60649 Gm22651-201ENSMUST00000157872 94 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm22316-201ENSMUST00000158012 216 ntBASIC2.58□□□□□ -2
ClpbQ60649 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.58□□□□□ -2
ClpbQ60649 Gm25956-201ENSMUST00000175115 217 ntBASIC2.58□□□□□ -2
ClpbQ60649 Mir5624-201ENSMUST00000176635 61 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm25397-201ENSMUST00000176951 92 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm24618-201ENSMUST00000177718 94 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm23953-201ENSMUST00000178214 94 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm26332-201ENSMUST00000179813 94 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm22863-201ENSMUST00000180265 94 ntBASIC2.58□□□□□ -2
ClpbQ60649 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 Mir6355-201ENSMUST00000183687 106 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm28995-201ENSMUST00000186625 261 ntBASIC2.58□□□□□ -2
ClpbQ60649 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 Gm6801-201ENSMUST00000190697 339 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm23128-202ENSMUST00000196578 133 ntBASIC2.58□□□□□ -2
ClpbQ60649 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.58□□□□□ -2
ClpbQ60649 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.58□□□□□ -2
ClpbQ60649 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ClpbQ60649 Gm22685-201ENSMUST00000082848 106 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm23462-201ENSMUST00000083264 104 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm23264-201ENSMUST00000083372 107 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm23040-201ENSMUST00000083869 163 ntBASIC2.58□□□□□ -2
ClpbQ60649 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.58□□□□□ -2
ClpbQ60649 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ClpbQ60649 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.58□□□□□ -2
ClpbQ60649 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ClpbQ60649 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ClpbQ60649 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ClpbQ60649 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.57□□□□□ -2
ClpbQ60649 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
ClpbQ60649 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.57□□□□□ -2
ClpbQ60649 Gm24068-201ENSMUST00000104513 132 ntBASIC2.57□□□□□ -2
ClpbQ60649 Mir1195-201ENSMUST00000116818 98 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm25543-201ENSMUST00000122678 312 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm26186-201ENSMUST00000157689 125 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm22945-201ENSMUST00000158557 157 ntBASIC2.57□□□□□ -2
ClpbQ60649 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm23921-201ENSMUST00000175258 107 ntBASIC2.57□□□□□ -2
ClpbQ60649 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm25528-201ENSMUST00000180264 132 ntBASIC2.57□□□□□ -2
ClpbQ60649 Mir6353-201ENSMUST00000183596 113 ntBASIC2.57□□□□□ -2
ClpbQ60649 Mir6917-201ENSMUST00000184111 61 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm29512-201ENSMUST00000185544 315 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm28110-201ENSMUST00000185782 315 ntBASIC2.57□□□□□ -2
ClpbQ60649 Gm29057-201ENSMUST00000186468 315 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms