Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm23753-201ENSMUST00000157575 149 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Gm25051-201ENSMUST00000158602 249 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Gm20399-201ENSMUST00000174652 132 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Gm37698-201ENSMUST00000192605 463 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Gm26265-202ENSMUST00000196326 133 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Mir767-201ENSMUST00000103256 107 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm22337-201ENSMUST00000157721 132 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm25253-201ENSMUST00000179958 107 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm42834-201ENSMUST00000196845 256 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm45080-201ENSMUST00000206648 283 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Gm18188-201ENSMUST00000219386 478 ntBASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf1Q5U4C3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm11356-201ENSMUST00000118974 192 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm24001-201ENSMUST00000158463 85 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm26141-201ENSMUST00000175299 126 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm38356-201ENSMUST00000194313 408 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm35857-201ENSMUST00000212739 178 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 AC123709.1-201ENSMUST00000224848 345 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Snord35b-201ENSMUST00000082833 87 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm26204-201ENSMUST00000082906 107 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Gm43256-201ENSMUST00000199995 3091 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scaf1Q5U4C3 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm22115-201ENSMUST00000103976 133 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm23923-201ENSMUST00000104108 133 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm15466-201ENSMUST00000122299 333 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm23326-201ENSMUST00000157419 105 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm23123-201ENSMUST00000157648 144 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm24727-201ENSMUST00000158231 144 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm29452-201ENSMUST00000187996 313 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm2189-201ENSMUST00000201419 429 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 AC122834.1-201ENSMUST00000227182 425 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Gm24355-201ENSMUST00000082858 122 ntBASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Scaf1Q5U4C3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Scaf1Q5U4C3 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm24127-201ENSMUST00000104110 130 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm24376-201ENSMUST00000104399 127 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm12722-201ENSMUST00000118507 493 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm6762-201ENSMUST00000121769 289 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 n-R5s150-201ENSMUST00000122705 108 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm25625-201ENSMUST00000157221 96 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm23350-201ENSMUST00000158429 103 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm17528-201ENSMUST00000171026 239 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm25457-201ENSMUST00000179509 107 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm27793-201ENSMUST00000183405 76 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm44476-201ENSMUST00000196225 91 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Gm24625-201ENSMUST00000082622 130 ntBASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Scaf1Q5U4C3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm23532-201ENSMUST00000104569 112 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm15497-201ENSMUST00000119137 551 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm23667-201ENSMUST00000157466 120 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm23584-201ENSMUST00000157655 129 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm23860-201ENSMUST00000179446 132 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm5002-201ENSMUST00000207145 223 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Mir384-201ENSMUST00000083565 88 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm10360-201ENSMUST00000097219 272 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scaf1Q5U4C3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms