Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Gm37377-201ENSMUST00000191733 304 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Gm43976-201ENSMUST00000203637 235 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Gm44687-201ENSMUST00000204975 235 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Gm45403-201ENSMUST00000209453 276 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Vps54Q5SPW0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Vps54Q5SPW0 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.59□□□□□ -2
Vps54Q5SPW0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Vps54Q5SPW0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm3788-201ENSMUST00000119949 136 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm14574-201ENSMUST00000120644 279 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm11834-201ENSMUST00000122257 585 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm22227-201ENSMUST00000157356 259 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm24857-201ENSMUST00000158061 310 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm7953-201ENSMUST00000168278 469 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.58□□□□□ -2
Vps54Q5SPW0 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Vps54Q5SPW0 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.58□□□□□ -2
Vps54Q5SPW0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm25094-201ENSMUST00000103992 131 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm12941-201ENSMUST00000117934 220 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm14972-201ENSMUST00000121780 364 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm22037-201ENSMUST00000157280 296 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm23331-201ENSMUST00000157423 108 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm43238-201ENSMUST00000196463 359 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm33654-201ENSMUST00000221704 215 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm21937-201ENSMUST00000222825 218 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Vps54Q5SPW0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Vps54Q5SPW0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
Vps54Q5SPW0 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.57□□□□□ -2
Vps54Q5SPW0 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Vps54Q5SPW0 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.56□□□□□ -2
Vps54Q5SPW0 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm24338-201ENSMUST00000104205 127 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm14296-202ENSMUST00000108931 750 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm22032-201ENSMUST00000116946 116 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm13672-201ENSMUST00000117554 459 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm12550-201ENSMUST00000118478 329 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm22073-201ENSMUST00000122668 189 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm26105-201ENSMUST00000157253 190 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm26186-201ENSMUST00000157689 125 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm29229-201ENSMUST00000188874 323 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm5023-201ENSMUST00000217442 587 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm40810-201ENSMUST00000219149 253 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm9318-201ENSMUST00000222444 438 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vps54Q5SPW0 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.56□□□□□ -2
Vps54Q5SPW0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Vps54Q5SPW0 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Vps54Q5SPW0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps54Q5SPW0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm14402-201ENSMUST00000122217 508 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm16355-201ENSMUST00000128606 231 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm24237-201ENSMUST00000157790 132 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm22192-201ENSMUST00000175128 85 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm22308-201ENSMUST00000177609 107 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm38041-201ENSMUST00000194445 661 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm15235-201ENSMUST00000200572 194 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm44881-201ENSMUST00000205425 367 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.55□□□□□ -2
Vps54Q5SPW0 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm22997-201ENSMUST00000082845 107 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm23721-201ENSMUST00000083005 107 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm25632-201ENSMUST00000083112 85 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Gm23453-201ENSMUST00000083326 106 ntBASIC2.55□□□□□ -2
Vps54Q5SPW0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps54Q5SPW0 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Gm15844-201ENSMUST00000118016 576 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Gm13913-201ENSMUST00000121126 260 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Gm25392-201ENSMUST00000157335 297 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Gm22083-201ENSMUST00000157586 102 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Mir6355-201ENSMUST00000183687 106 ntBASIC2.54□□□□□ -2
Vps54Q5SPW0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.54□□□□□ -2
Vps54Q5SPW0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 359.3 ms